RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 KDM4EB2RXH2 506 aaPredicted RBP13.6□□□□□ -0.23
GINS3-203ENST00000426538 PLPP3O14495 311 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 IMPA2O14732 288 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 DBTP11182 482 aaKnown RBP13.6□□□□□ -0.23
GINS3-203ENST00000426538 ACVR2AP27037 513 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 CDH11P55287 796 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 OR2B6P58173 313 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 TLE3Q04726 772 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 ITGADQ13349 1161 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 PLBD1Q6P4A8 553 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 IGFL2Q6UWQ7 119 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 GID4Q8IVV7 300 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 LRRC75AQ8NAA5 344 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 OR4K13Q8NH42 304 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 SMPDL3BQ92485 455 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 CCDC86Q9H6F5 360 aaKnown RBP13.6□□□□□ -0.23
GINS3-203ENST00000426538 HINT3Q9NQE9 182 aaKnown RBP13.6□□□□□ -0.23
GINS3-203ENST00000426538 INIPQ9NRY2 104 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 ALKBH4Q9NXW9 302 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 SEC14L4Q9UDX3 406 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 TRAPPC4Q9Y296 219 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 B3GALT5Q9Y2C3 310 aa13.6□□□□□ -0.23
GINS3-203ENST00000426538 DPPA5A6NC42 116 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SULT2B1O00204 365 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
GINS3-203ENST00000426538 CEACAM4O75871 244 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 CDK1P06493 297 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 STSP08842 583 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 HTR1AP08908 422 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 PIPP12273 146 aaPredicted RBP13.59□□□□□ -0.23
GINS3-203ENST00000426538 SDHAP31040 664 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 MTNR1AP48039 350 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 MEOX1P50221 254 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 TNFSF10P50591 281 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 ZNF91Q05481 1191 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.59□□□□□ -0.23
GINS3-203ENST00000426538 PUDPQ08623 228 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 KLHL22Q53GT1 634 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 EMC4Q5J8M3 183 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 ZNF362Q5T0B9 420 aaPredicted RBP13.59□□□□□ -0.23
GINS3-203ENST00000426538 AADACL4Q5VUY2 407 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 GPR139Q6DWJ6 353 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 TMPPEQ6ZT21 453 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 JAZF1Q86VZ6 243 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SVOPQ8N4V2 548 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SLC39A7Q92504 469 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SFXN2Q96NB2 322 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 TTTY12Q9BZ98 90 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 CHST11Q9NPF2 352 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 FKBP14Q9NWM8 211 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 ZFHX4Q86UP3 3567 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 IRGMA1A4Y4 181 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 LINC01387J3KSC0 135 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SERPINI2O75830 405 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 AKR7A3O95154 331 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 C21orf33P30042 268 aaPredicted RBP13.59□□□□□ -0.23
GINS3-203ENST00000426538 RFC3P40938 356 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SLC15A1P46059 708 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 DIO1P49895 249 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SLC35A1P78382 337 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 ZP4Q12836 540 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 CRMP1Q14194 572 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 KLHL12Q53G59 568 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 WIPI1Q5MNZ9 446 aaPredicted RBP13.59□□□□□ -0.23
GINS3-203ENST00000426538 FAM122BQ7Z309 247 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SPACA3Q8IXA5 215 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 CYB561A3Q8NBI2 242 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SLC37A3Q8NCC5 494 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SDR9C7Q8NEX9 313 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 PTP4A1Q93096 173 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 MIB2Q96AX9 1013 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 RASD2Q96D21 266 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 SCMH1Q96GD3 660 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 Q96M85 177 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 OR2B2Q9GZK3 357 aa13.59□□□□□ -0.23
GINS3-203ENST00000426538 ZNF703Q9H7S9 590 aaPredicted RBP13.59□□□□□ -0.23
GINS3-203ENST00000426538 ZNF346Q9UL40 294 aaKnown RBP13.59□□□□□ -0.23
GINS3-203ENST00000426538 TEX13CA0A0J9YWL9 993 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 A0A1W2PRG6 482 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 PMS2P2O95744 297 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 HPNP05981 417 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 SHC1P29353 583 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 HTR1FP30939 366 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 ATP6V1E1P36543 226 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 EIF2S3P41091 472 aaKnown RBP13.58□□□□□ -0.24
GINS3-203ENST00000426538 ID4P47928 161 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 SLC16A1P53985 500 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 B3GALT5-AS1P59052 145 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 RPS7P62081 194 aaKnown RBP13.58□□□□□ -0.24
GINS3-203ENST00000426538 CSNK2A1P68400 391 aaPredicted RBP13.58□□□□□ -0.24
GINS3-203ENST00000426538 EMX1Q04741 257 aaPredicted RBP13.58□□□□□ -0.24
GINS3-203ENST00000426538 NEDD8Q15843 81 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 MEPCEQ7L2J0 689 aaKnown RBP13.58□□□□□ -0.24
GINS3-203ENST00000426538 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.58□□□□□ -0.24
GINS3-203ENST00000426538 SLC22A16Q86VW1 577 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 TM9SF4Q92544 642 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 RNFT2Q96EX2 444 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 TMEM80Q96HE8 168 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 NMNAT3Q96T66 252 aa13.58□□□□□ -0.24
GINS3-203ENST00000426538 SMAD5Q99717 465 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms