RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 ACHEP22303 614 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 NR4A1P22736 598 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 CLDN17P56750 224 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 POU3F1Q03052 451 aaPredicted RBP11.62□□□□□ -0.55
VEGFB-202ENST00000426086 PHYHD1Q5SRE7 291 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 MRPL2Q5T653 305 aaKnown RBP11.62□□□□□ -0.55
VEGFB-202ENST00000426086 ATAD3BQ5T9A4 648 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 OR51F2Q8NH61 342 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 C22orf15Q8WYQ4 148 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 ZNF75AQ96N20 296 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 ZNF317Q96PQ6 595 aaPredicted RBP11.62□□□□□ -0.55
VEGFB-202ENST00000426086 ZDHHC2Q9UIJ5 367 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 FZR1Q9UM11 496 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 CMAHPQ9Y471 501 aa11.62□□□□□ -0.55
VEGFB-202ENST00000426086 CFAP73A6NFT4 308 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 SMIM23A6NLE4 172 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 RPL36A-HNRNPH2H7BZ11 118 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 M0R233 179 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 COPEO14579 308 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 NPHS1O60500 1241 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 HOXB1P14653 301 aaPredicted RBP11.61□□□□□ -0.55
VEGFB-202ENST00000426086 KRT4P19013 534 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 RPS4Y1P22090 263 aaKnown RBP11.61□□□□□ -0.55
VEGFB-202ENST00000426086 UQCRC2P22695 453 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 PAX7P23759 505 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 ACAA2P42765 397 aaKnown RBP11.61□□□□□ -0.55
VEGFB-202ENST00000426086 LIMS1P48059 325 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 UBA52P62987 128 aaKnown RBP11.61□□□□□ -0.55
VEGFB-202ENST00000426086 MAPK11Q15759 364 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 CEACAM16Q2WEN9 425 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 SLC9B1Q4ZJI4 515 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 PRAMEF8Q5VWM4 474 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 PRAMEF7Q5VXH5 474 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 GSPT2Q8IYD1 628 aaKnown RBP11.61□□□□□ -0.55
VEGFB-202ENST00000426086 RIBC1Q8N443 379 aaPredicted RBP11.61□□□□□ -0.55
VEGFB-202ENST00000426086 RDH5Q92781 318 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 TAF15Q92804 592 aaKnown RBP eCLIP11.61□□□□□ -0.55
VEGFB-202ENST00000426086 TUBGCP3Q96CW5 907 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 B3GNT2Q9NY97 397 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 B3GAT1Q9P2W7 334 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 RAB21Q9UL25 225 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 PPIAL4AQ9Y536 164 aa11.61□□□□□ -0.55
VEGFB-202ENST00000426086 TRAV20A0A0B4J274 112 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 VSTM5A8MXK1 200 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 FTCDNL1E5RQL4 147 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 PPIHO43447 177 aaKnown RBP11.6□□□□□ -0.55
VEGFB-202ENST00000426086 PLPP2O43688 288 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 NPIPB7O75200 414 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 DEAF1O75398 565 aaPredicted RBP11.6□□□□□ -0.55
VEGFB-202ENST00000426086 AGR2O95994 175 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 HLA-HP01893 362 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 NAT2P11245 290 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 ZNF35P13682 527 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 PRG2P13727 222 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 CXCR1P25024 350 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 ARR3P36575 388 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 MAGEB1P43366 347 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 MAP2K6P52564 334 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 AVPI1Q5T686 147 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 C1orf140Q5VVS0 124 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 SHISA2Q6UWI4 295 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 C1QL2Q7Z5L3 287 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 WDFY1Q8IWB7 410 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 CMIPQ8IY22 773 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 CADM2Q8N3J6 435 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 OR8J2Q8NGG1 315 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 RNF217Q8TC41 542 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 NEURL3Q96EH8 262 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 TAPBPLQ9BX59 468 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 SLC17A7Q9P2U7 560 aa11.6□□□□□ -0.55
VEGFB-202ENST00000426086 MARCOQ9UEW3 520 aaPredicted RBP11.6□□□□□ -0.55
VEGFB-202ENST00000426086 A8MVM7 634 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 MPZL1O95297 269 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 HKR1P10072 659 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 PNMTP11086 282 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 CAPZA2P47755 286 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 EVX1P49640 407 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 SH3BGRP55822 239 aaPredicted RBP11.59□□□□□ -0.55
VEGFB-202ENST00000426086 TMEM33P57088 247 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 MYBPC1Q00872 1141 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 MVKQ03426 396 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 SCGB2A2Q13296 93 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 ALKBH6Q3KRA9 238 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 ZNF836Q6ZNA1 936 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 RNF130Q86XS8 419 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 VRK2Q86Y07 508 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 CNPY4Q8N129 248 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 EPS8L3Q8TE67 593 aaKnown RBP11.59□□□□□ -0.55
VEGFB-202ENST00000426086 PPP1R36Q96LQ0 422 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 DUX5Q96PT3 197 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 JMJD8Q96S16 334 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 SLC35A5Q9BS91 424 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 PTDSS2Q9BVG9 487 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 SUCNR1Q9BXA5 334 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 PARD6BQ9BYG5 372 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 MS4A5Q9H3V2 200 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 ZNF224Q9NZL3 707 aa11.59□□□□□ -0.55
VEGFB-202ENST00000426086 RASD1Q9Y272 281 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms