RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443	NDC1	Q9BTX1	674 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	MEPE	Q9NQ76	525 aa	Predicted RBP	11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	C14orf105	Q9NVL8	296 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	EIF3K	Q9UBQ5	218 aa	Known RBP	11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	MMP17	Q9ULZ9	603 aa		11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	MRPS33	Q9Y291	106 aa	Known RBP	11.92	□□□□□ -0.5
COL12A1-205	ENST00000425443	FAM221B	A6H8Z2	402 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ARHGEF9	O43307	516 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	SGCE	O43556	437 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	CRYZ	Q08257	329 aa	Known RBP	11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ALG10B	Q5I7T1	473 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	RPL13AP3	Q6NVV1	102 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	RNF44	Q7L0R7	432 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	GATS	Q8NAP1	163 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	AVL9	Q8NBF6	648 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ADGRL4	Q9HBW9	690 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	PRDM9	Q9NQV7	894 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	HPF1	Q9NWY4	346 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	MGAT4A	Q9UM21	535 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	SC5D	O75845	299 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ADRB1	P08588	477 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	HOXD4	P09016	255 aa	Predicted RBP	11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	SLC35E2	P0CK97	266 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	RD3L	P0DJH9	198 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	NPR2	P20594	1047 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	GIF	P27352	417 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	PSMB10	P40306	273 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ALKBH1	Q13686	389 aa	Known RBP	11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	DGAT2L6	Q6ZPD8	337 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	LRRC17	Q8N6Y2	441 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR52E2	Q8NGJ4	325 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	THAP4	Q8WY91	577 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	PIGK	Q92643	395 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	GHSR	Q92847	366 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNF285	Q96NJ3	590 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	PPA2	Q9H2U2	334 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	HEXA-AS1	Q9H8Q6	139 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ADAM30	Q9UKF2	790 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	FBXL21	Q9UKT6	434 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443		A0A1B0GVT2	93 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	SLC22A31	A6NKX4	558 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	SSTR2	P30874	369 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	SKP1	P63208	163 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	UBE2I	P63279	158 aa	Known RBP	11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	MCAT	Q8IVS2	390 aa	Known RBP	11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	SIAH3	Q8IW03	269 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	SLC44A3	Q8N4M1	653 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR6K6	Q8NGW6	343 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR51Q1	Q8NH59	317 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	RLN3	Q8WXF3	142 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	SMPDL3B	Q92485	455 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	YIPF5	Q969M3	257 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	KLHDC7B	Q96G42	594 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ERMAP	Q96PL5	475 aa	Predicted RBP	11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443	ADAM18	Q9Y3Q7	739 aa		11.91	□□□□□ -0.5
COL12A1-205	ENST00000425443		A0A087WV48	116 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443		A0A1B0GWA3	101 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	HRK	O00198	91 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	CLDN4	O14493	209 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	CBX7	O95931	251 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	MT-ND5	P03915	603 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	CD63	P08962	238 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	RNH1	P13489	461 aa	Known RBP	11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	ATF1	P18846	271 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	RBMS1	P29558	406 aa	Known RBP	11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	RPL4	P36578	427 aa	Known RBP	11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	BLK	P51451	505 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	PER3	P56645	1201 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	RAB14	P61106	215 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	MAT1A	Q00266	395 aa	Known RBP	11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	LGALS3BP	Q08380	585 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	SSPN	Q14714	243 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	POU4F3	Q15319	338 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	STPG1	Q5TH74	334 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	KIAA0895L	Q68EN5	471 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	ARHGAP11A	Q6P4F7	1023 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNF613	Q6PF04	617 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	PXK	Q7Z7A4	578 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	DEFB119	Q8N690	84 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNF680	Q8NEM1	530 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	OR4D10	Q8NGI6	311 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNRF4	Q8WWF5	429 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	ACOT12	Q8WYK0	555 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	GPR137	Q96N19	417 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	PDCD1LG2	Q9BQ51	273 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	MED28	Q9H204	178 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	SEMA6C	Q9H3T2	930 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	ASH2L	Q9UBL3	628 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	ZNF346	Q9UL40	294 aa	Known RBP	11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	AK6	Q9Y3D8	172 aa	Known RBP	11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	PLPP2	O43688	288 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	IFNG	P01579	166 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	MT-ND4	P03905	459 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	IGHV4-34	P06331	123 aa		11.9	□□□□□ -0.5
COL12A1-205	ENST00000425443	NGFR	P08138	427 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms