RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 PIP5KL1Q5T9C9 394 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 RAB12Q6IQ22 244 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 GLB1LQ6UWU2 654 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 UNQ9370/PRO34162Q6UXP9 181 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 RSPO2Q6UXX9 243 aaPredicted RBP5.59□□□□□ -1.51
CHD2-202ENST00000420239 ZNF813Q6ZN06 617 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 MEPCEQ7L2J0 689 aaKnown RBP5.59□□□□□ -1.51
CHD2-202ENST00000420239 ZNF546Q86UE3 836 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 NKAIN4Q8IVV8 208 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 ZNF565Q8N9K5 539 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 PIGXQ8TBF5 258 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 ZNF480Q8WV37 535 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 FCAMRQ8WWV6 532 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 PHYHIPQ92561 330 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 GHSRQ92847 366 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 HIST1H2BAQ96A08 127 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 TMEM41AQ96HV5 264 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 SAMD8Q96LT4 415 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 VRK1Q99986 396 aaPredicted RBP5.59□□□□□ -1.51
CHD2-202ENST00000420239 NDC1Q9BTX1 674 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 TTTY10Q9BZA0 68 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 CHST6Q9GZX3 395 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 ZDHHC4Q9NPG8 344 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 MIEF1Q9NQG6 463 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 TAS2R10Q9NYW0 307 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 AHSPQ9NZD4 102 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 TNFSF18Q9UNG2 199 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 NTNG1Q9Y2I2 539 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 GPR55Q9Y2T6 319 aaPredicted RBP5.59□□□□□ -1.51
CHD2-202ENST00000420239 DOCK3Q8IZD9 2030 aa5.59□□□□□ -1.51
CHD2-202ENST00000420239 KANTRA0A1W2PQU2 76 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 C9orf170A2RU37 121 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 BLACEA4D250 179 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 TRAPPC13A5PLN9 417 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 TMEM202A6NGA9 273 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 CPSF4LA6NMK7 179 aaKnown RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 C1orf196B1AJZ1 125 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 IMPA2O14732 288 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 MTX2O75431 263 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 C1orf105O95561 183 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 THY1P04216 161 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 RLN1P04808 185 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 HOXC4P09017 264 aaPredicted RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 ZGLP1P0C6A0 271 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 NID1P14543 1247 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 IL9P15248 144 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 ZNF3P17036 446 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 HMGA1P17096 107 aaKnown RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 RCC1P18754 421 aaPredicted RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 ABCD3P28288 659 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 OR1G1P47890 313 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 PGDP52209 483 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 MANFP55145 182 aaKnown RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 CLDN12P56749 244 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 STARD6P59095 220 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 RPS11P62280 158 aaKnown RBP eCLIP5.59□□□□□ -1.52
CHD2-202ENST00000420239 MEF2AQ02078 507 aaPredicted RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 ST3GAL3Q11203 375 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 HSPB3Q12988 150 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 TEAD2Q15562 447 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 FAM110CQ1W6H9 321 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 EXOSC6Q5RKV6 272 aaKnown RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 CDPF1Q6NVV7 123 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 C3orf33Q6P1S2 294 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 TMEM64Q6YI46 380 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 ETV3LQ6ZN32 361 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 FCRLAQ7L513 359 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 OR2AP1Q8NGE2 309 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 OR4C16Q8NGL9 310 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 SUN3Q8TAQ9 357 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 WFDC5Q8TCV5 224 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 DUSP19Q8WTR2 217 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 ACOT11Q8WXI4 607 aaPredicted RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 PHYHIPLQ96FC7 376 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 SLC35G5Q96KT7 338 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 MRGPRX3Q96LB0 322 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 PFDN5Q99471 154 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 TCEAL7Q9BRU2 100 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 NAA11Q9BSU3 229 aaPredicted RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 ZNF471Q9BX82 626 aaPredicted RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 SLC25A18Q9H1K4 315 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 RHBGQ9H310 441 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 FKRPQ9H9S5 495 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 H2AFY2Q9P0M6 372 aaPredicted RBP5.59□□□□□ -1.52
CHD2-202ENST00000420239 C5AR2Q9P296 337 aa5.59□□□□□ -1.52
CHD2-202ENST00000420239 COL4A3Q01955 1670 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 DENND4CQ5VZ89 1909 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 C2orf74A8MZ97 194 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 H7C4K7 107 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 SULT2B1O00204 365 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 CDC42EP2O14613 210 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 SMAD9O15198 467 aaKnown RBP5.58□□□□□ -1.52
CHD2-202ENST00000420239 PIN1P1O15428 100 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 MAGEB4O15481 346 aaPredicted RBP5.58□□□□□ -1.52
CHD2-202ENST00000420239 TSPAN6O43657 245 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 STX11O75558 287 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 PPP1R3DO95685 299 aa5.58□□□□□ -1.52
CHD2-202ENST00000420239 TBX6O95947 436 aaPredicted RBP5.58□□□□□ -1.52
CHD2-202ENST00000420239 TMIGD3P0DMS9 266 aaPredicted RBP5.58□□□□□ -1.52
CHD2-202ENST00000420239 CTSAP10619 480 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms