RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 KLHL24Q6TFL4 600 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 EPHX4Q8IUS5 362 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 LSMEM1Q8N8F7 131 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 OR10H5Q8NGA6 315 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 C10orf82Q8WW14 230 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 SPDL1Q96EA4 605 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 RSPO3Q9BXY4 272 aaPredicted RBP8.25□□□□□ -1.09
NUP50-205ENST00000419387 C12orf10Q9HB07 376 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 OBP2BQ9NPH6 170 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 SLC25A37Q9NYZ2 338 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 CCDC167Q9P0B6 97 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 RPS6KB2Q9UBS0 482 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 GMEB1Q9Y692 573 aa8.25□□□□□ -1.09
NUP50-205ENST00000419387 TLN2Q9Y4G6 2542 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 ELOA3DA6NLF2 546 aaPredicted RBP8.24□□□□□ -1.09
NUP50-205ENST00000419387 ZNF587BE7ETH6 402 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 H7C417 338 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 NR5A2O00482 541 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 CD5LO43866 347 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 OR2T1O43869 369 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 UPK3AO75631 287 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 LGI1O95970 557 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 VIMP08670 466 aaKnown RBP8.24□□□□□ -1.09
NUP50-205ENST00000419387 ARAFP10398 606 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 PNMTP11086 282 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 BMP4P12644 408 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 ZNF43P17038 809 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 RPS5P46782 204 aaKnown RBP8.24□□□□□ -1.09
NUP50-205ENST00000419387 ATP4BP51164 291 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 NUDT6P53370 316 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 CDK6Q00534 326 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 CHRNB3Q05901 458 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 SF3A3Q12874 501 aaKnown RBP eCLIP8.24□□□□□ -1.09
NUP50-205ENST00000419387 ELOA3BQ3SY89 546 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 TBRG1Q3YBR2 411 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 GCNT6Q5T4J0 391 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 METTL21CQ5VZV1 264 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 REEP3Q6NUK4 255 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 DHRS4L2Q6PKH6 230 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 C5orf46Q6UWT4 87 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 C6orf89Q6UWU4 347 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 MSRB3Q8IXL7 192 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 KDM8Q8N371 416 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 ELOA3Q8NG57 546 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 OR1K1Q8NGR3 316 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 NFKBIDQ8NI38 313 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 BCL2L2Q92843 193 aaPredicted RBP8.24□□□□□ -1.09
NUP50-205ENST00000419387 KTI12Q96EK9 354 aaPredicted RBP8.24□□□□□ -1.09
NUP50-205ENST00000419387 OXGR1Q96P68 337 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 PTDSS2Q9BVG9 487 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 SPATA5L1Q9BVQ7 753 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 TMEM120AQ9BXJ8 343 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 LINC00470Q9BZP3 86 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 VAPAQ9P0L0 249 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 ADAM21Q9UKJ8 722 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 MOKQ9UQ07 419 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 PMF1-BGLAPU3KQ54 211 aa8.24□□□□□ -1.09
NUP50-205ENST00000419387 ALPK2Q86TB3 2170 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 IGHV4-30-2A0A087WSY4 118 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 TRBV5-3A0A0A0MS03 114 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 ARPC4-TTLL3A0A0A6YYG9 625 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 IGHV1-18A0A0C4DH31 117 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 A0A0G2JND7 137 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 A0A1B0GWA3 101 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 EVPLLA8MZ36 301 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 ATP6V1G2-DDX39BF2Z307 99 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 AIM2O14862 343 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 TLX2O43763 284 aaPredicted RBP8.23□□□□□ -1.09
NUP50-205ENST00000419387 TPST1O60507 370 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 FZD7O75084 574 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 GPX2P18283 190 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 GTF2E2P29084 291 aaKnown RBP8.23□□□□□ -1.09
NUP50-205ENST00000419387 CLDN17P56750 224 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 UBE2NP61088 152 aaKnown RBP8.23□□□□□ -1.09
NUP50-205ENST00000419387 LGALS3BPQ08380 585 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 SCARB2Q14108 478 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 AGKQ53H12 422 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 FAM69AQ5T7M9 428 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 HMBOX1Q6NT76 420 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 ULK3Q6PHR2 472 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 CLEC2AQ6UVW9 174 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 LINGO2Q7L985 606 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 NET1Q7Z628 596 aaPredicted RBP8.23□□□□□ -1.09
NUP50-205ENST00000419387 PIGWQ7Z7B1 504 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 KRT73Q86Y46 540 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 C10orf111Q8N326 155 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 MAGEE2Q8TD90 523 aaPredicted RBP8.23□□□□□ -1.09
NUP50-205ENST00000419387 DNAJA4Q8WW22 397 aaPredicted RBP8.23□□□□□ -1.09
NUP50-205ENST00000419387 HTRA1Q92743 480 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 SLC38A4Q969I6 547 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 TAAR8Q969N4 342 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 SLC38A2Q96QD8 506 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 SIKE1Q9BRV8 207 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 TMEM38AQ9H6F2 299 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 SAR1AQ9NR31 198 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 YAE1D1Q9NRH1 226 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 KLHL14Q9P2G3 628 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 CORO2BQ9UQ03 480 aa8.23□□□□□ -1.09
NUP50-205ENST00000419387 HEATR1Q9H583 2144 aaKnown RBP8.23□□□□□ -1.09
NUP50-205ENST00000419387 ZANQ9Y493 2812 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms