RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MESTQ5EB52 335 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNF684Q5T5D7 378 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 C1orf140Q5VVS0 124 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 LEG1Q6P5S2 330 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 SSX6Q7RTT6 188 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 MARCH9Q86YJ5 346 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 ZFP41Q8N8Y5 198 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 SYT14Q8NB59 555 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 OR2Y1Q8NGV0 311 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNF519Q8TB69 540 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 ZPLD1Q8TCW7 415 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 DUSP19Q8WTR2 217 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 ZMYND19Q96E35 227 aaPredicted RBP8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 C1GALT1C1Q96EU7 318 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 PGLYRP3Q96LB9 341 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 FRMD6Q96NE9 622 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 TSPAN32Q96QS1 320 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 DCLRE1CQ96SD1 692 aaKnown RBP8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 NMNAT3Q96T66 252 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 MNTQ99583 582 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 TM9SF2Q99805 663 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 AKIRIN1Q9H9L7 192 aaPredicted RBP8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 CPNE5Q9HCH3 593 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 FANCFQ9NPI8 374 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 KLHL1Q9NR64 748 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 TOR4AQ9NXH8 423 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 QPCTLQ9NXS2 382 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 MRPL39Q9NYK5 338 aaKnown RBP8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 TAS2R5Q9NYW4 299 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 PLEKHB1Q9UF11 243 aaPredicted RBP8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 GPN3Q9UHW5 284 aaPredicted RBP8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 ST6GALNAC2Q9UJ37 374 aa8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 SIRT4Q9Y6E7 314 aaPredicted RBP8.2□□□□□ -1.1
LINCMD1-201ENST00000418518 COL6A3P12111 3177 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 LNP1A1A4G5 178 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 BLOC1S5-TXNDC5H3BN57 136 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 LRRTM2O43300 516 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNF208O43345 1280 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 OR2T1O43869 369 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 GDF9O60383 454 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 CBFA2T3O75081 653 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 SLC25A12O75746 678 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 WISP1O95388 367 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 AHSA1O95433 338 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 DLGAP3O95886 979 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 IGHEP01854 428 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 HIST1H2ABP04908 130 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 MRPL3P09001 348 aaKnown RBP8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 SDC2P34741 201 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 RPS5P46782 204 aaKnown RBP8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 TGM4P49221 684 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 RUNX1T1Q06455 604 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 HNRNPA0Q13151 305 aaKnown RBP8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 CDK5R1Q15078 307 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 CCDC58Q4VC31 144 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 EEF1A1P5Q5VTE0 462 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 TCEAL6Q6IPX3 200 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 C16orf47Q6ZP98 133 aaPredicted RBP8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 TRILQ7L0X0 811 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 HIST3H2AQ7L7L0 130 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 SLC16A9Q7RTY1 509 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 PXKQ7Z7A4 578 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 JAZF1Q86VZ6 243 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 DND1Q8IYX4 353 aaKnown RBP8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 CENPSQ8N2Z9 138 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 RFLNBQ8N5W9 214 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 PARP16Q8N5Y8 322 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 C10orf53Q8N6V4 93 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 FADS6Q8N9I5 356 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 SCAIQ8N9R8 606 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 TEX19Q8NA77 164 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 MFSD8Q8NHS3 518 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 M1APQ8TC57 530 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 HAVCR2Q8TDQ0 301 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNRF4Q8WWF5 429 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 ASB15Q8WXK1 588 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 HIST1H2ACQ93077 130 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 MR1Q95460 341 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 TCEAL3Q969E4 200 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 TMEM203Q969S6 136 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 PMEPA1Q969W9 287 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 PPP1R14BQ96C90 147 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 C8orf44Q96CB5 159 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 SPACA9Q96E40 222 aaPredicted RBP8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 RNF31Q96EP0 1072 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 COX4I2Q96KJ9 171 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 C4orf36Q96KX1 117 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 MRGPRX4Q96LA9 322 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 TBX5Q99593 518 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 ZPBPQ9BS86 351 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 ALG12Q9BV10 488 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 CCDC32Q9BV29 185 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 MFRPQ9BY79 579 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 DEFB126Q9BYW3 111 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 ARRDC1-AS1Q9H2J1 176 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 KCNN2Q9H2S1 579 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 SMOC1Q9H4F8 434 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 SNTG1Q9NSN8 517 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 GALNT8Q9NY28 637 aa8.19□□□□□ -1.1
LINCMD1-201ENST00000418518 VSX1Q9NZR4 365 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms