RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TMEM69Q5SWH9 247 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 ZNF767PQ75MW2 155 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 SLC22A18ASQ8N1D0 253 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 FAM160A2Q8N612 972 aaPredicted RBP10.88□□□□□ -0.67
LIMK1-202ENST00000418310 LSM14AQ8ND56 463 aaKnown RBP10.88□□□□□ -0.67
LIMK1-202ENST00000418310 ELOA3Q8NG57 546 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 OR51A4Q8NGJ6 313 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 MSANTD3Q96H12 275 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 DGAT2Q96PD7 388 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 LYRM4Q9HD34 91 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 Q9N2J8 555 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 INPP5EQ9NRR6 644 aa10.88□□□□□ -0.67
LIMK1-202ENST00000418310 PNO1Q9NRX1 252 aaKnown RBP10.88□□□□□ -0.67
LIMK1-202ENST00000418310 MED12Q93074 2177 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 A0A087WV62 115 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 A6NCN8 305 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 SERPINA3P01011 423 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 OR2T7P0C7T2 308 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
LIMK1-202ENST00000418310 ZP1P60852 638 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 CD226Q15762 336 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 LGALSLQ3ZCW2 172 aaPredicted RBP10.87□□□□□ -0.67
LIMK1-202ENST00000418310 PRAMEF17Q5VTA0 474 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 TEX261Q6UWH6 196 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 SLC35D2Q76EJ3 337 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 CCDC28AQ8IWP9 274 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 NPEPL1Q8NDH3 523 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 OR2T27Q8NH04 317 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 MAP3K3Q99759 626 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 JAM3Q9BX67 310 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 TCF7L1Q9HCS4 588 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 C14orf105Q9NVL8 296 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 SOHLH2Q9NX45 425 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 CYP8B1Q9UNU6 501 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 U3KQ87 197 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 KCNJ13O60928 360 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 SLC22A5O76082 557 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 RGS11O94810 467 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 BLVRAP53004 296 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 PITPNAQ00169 270 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 LGALS3BPQ08380 585 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 RGP1Q92546 391 aaPredicted RBP10.87□□□□□ -0.67
LIMK1-202ENST00000418310 SLC25A36Q96CQ1 311 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 SLC25A38Q96DW6 304 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 OR8D2Q9GZM6 311 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 CLEC4MQ9H2X3 399 aaPredicted RBP10.87□□□□□ -0.67
LIMK1-202ENST00000418310 NKX2-4Q9H2Z4 354 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 HRASLSQ9HDD0 168 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 PRTFDC1Q9NRG1 225 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.87□□□□□ -0.67
LIMK1-202ENST00000418310 ZNF224Q9NZL3 707 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 MGAT4CQ9UBM8 478 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 SLC6A5Q9Y345 797 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 NPFFR2Q9Y5X5 522 aa10.87□□□□□ -0.67
LIMK1-202ENST00000418310 C7orf66A4D0T2 115 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 RLN1P04808 185 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 PROS1P07225 676 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 MMP15P51511 669 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 ACTA2P62736 377 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 ACTG2P63267 376 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 EXOSC2Q13868 293 aaKnown RBP10.86□□□□□ -0.67
LIMK1-202ENST00000418310 TRAM1Q15629 374 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 LIPNQ5VXI9 398 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 DPY19L4Q7Z388 723 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 OR8S1Q8NH09 359 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 ZNF563Q8TA94 476 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 PPP1R14AQ96A00 147 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 ZNF524Q96C55 264 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 MTIF3Q9H2K0 278 aaKnown RBP10.86□□□□□ -0.67
LIMK1-202ENST00000418310 NARFLQ9H6Q4 476 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 CA10Q9NS85 328 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 MRPL39Q9NYK5 338 aaKnown RBP10.86□□□□□ -0.67
LIMK1-202ENST00000418310 PIAS3Q9Y6X2 628 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 MPC2O95563 127 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 SLC35E2P0CK97 266 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 ITPKBP27987 946 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 GRK6P43250 576 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 CCR9P51686 369 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 RAB38P57729 211 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 KIAA1024LP59773 190 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 SNTA1Q13424 505 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 GAS6Q14393 721 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 RPL22L1Q6P5R6 122 aaKnown RBP10.86□□□□□ -0.67
LIMK1-202ENST00000418310 NHLRC1Q6VVB1 395 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 SLC38A6Q8IZM9 456 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 BCORP1Q8N888 145 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 ADAMTS14Q8WXS8 1223 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 ATOH1Q92858 354 aaPredicted RBP10.86□□□□□ -0.67
LIMK1-202ENST00000418310 RANBP3Q9H6Z4 567 aaPredicted RBP10.86□□□□□ -0.67
LIMK1-202ENST00000418310 WDR76Q9H967 626 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 DLL4Q9NR61 685 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 RXFP3Q9NSD7 469 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 ANKRD10Q9NXR5 420 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 RTTNQ86VV8 2226 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 VPS13AQ96RL7 3174 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 IFITM5A6NNB3 132 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 ZNF879B4DU55 563 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 S1PR1P21453 382 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 GALP22466 123 aa10.86□□□□□ -0.67
LIMK1-202ENST00000418310 CDK2P24941 298 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms