RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 SLC22A2O15244 555 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 KRT34O76011 436 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 PTAFRP25105 342 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 GRPRP30550 384 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 PTH2RP49190 550 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 SELENOPP49908 381 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 ZNF83P51522 516 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 RPS4XP62701 263 aaKnown RBP13.46□□□□□ -0.25
NUP50-204ENST00000417702 IL1RL1Q01638 556 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 DUSP7Q16829 419 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 VMACQ2NL98 169 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 RABL3Q5HYI8 236 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 C1QTNF12Q5T7M4 302 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 REP15Q6BDI9 236 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 NIPAL3Q6P499 406 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 ZNF613Q6PF04 617 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 H1FNTQ75WM6 255 aaPredicted RBP13.46□□□□□ -0.25
NUP50-204ENST00000417702 YTHDF3Q7Z739 585 aaKnown RBP13.46□□□□□ -0.25
NUP50-204ENST00000417702 SNX32Q86XE0 403 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 KRTAP1-3Q8IUG1 177 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 EPHX4Q8IUS5 362 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 KDM8Q8N371 416 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 OR6S1Q8NH40 331 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 LILRB1Q8NHL6 650 aaPredicted RBP13.46□□□□□ -0.25
NUP50-204ENST00000417702 ZNF417Q8TAU3 575 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 SMAP2Q8WU79 429 aaPredicted RBP13.46□□□□□ -0.25
NUP50-204ENST00000417702 RASSF5Q8WWW0 418 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 NEUROG1Q92886 237 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 ZNF587Q96SQ5 575 aaPredicted RBP13.46□□□□□ -0.25
NUP50-204ENST00000417702 WFDC6Q9BQY6 131 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 DLL4Q9NR61 685 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 SLC17A5Q9NRA2 495 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 GID8Q9NWU2 228 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 NPAP1Q9NZP6 1156 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 AMDHD2Q9Y303 409 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 CORINQ9Y5Q5 1042 aa13.46□□□□□ -0.25
NUP50-204ENST00000417702 MAGED1Q9Y5V3 778 aaPredicted RBP13.46□□□□□ -0.25
NUP50-204ENST00000417702 M0R1B8 84 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 AKAP8O43823 692 aaKnown RBP13.45□□□□□ -0.26
NUP50-204ENST00000417702 SNX3O60493 162 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 TPST2O60704 377 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 FZD7O75084 574 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 NQO1P15559 274 aaKnown RBP13.45□□□□□ -0.26
NUP50-204ENST00000417702 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
NUP50-204ENST00000417702 CBLP22681 906 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 CDH11P55287 796 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 CDH12P55289 794 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 CLDN17P56750 224 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 PRPS1P60891 318 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 NRF1Q16656 503 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 DEPDC4Q8N2C3 294 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
NUP50-204ENST00000417702 C10orf53Q8N6V4 93 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 WDR31Q8NA23 367 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 GPR32P1Q8NGA4 272 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 OR6T1Q8NGN1 323 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 IGFBPL1Q8WX77 278 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 TAMM41Q96BW9 452 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 TMEM43Q9BTV4 400 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 ASPNQ9BXN1 380 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 ZNF701Q9NV72 531 aaPredicted RBP13.45□□□□□ -0.26
NUP50-204ENST00000417702 FAIMQ9NVQ4 179 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 FAM53CQ9NYF3 392 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 CISD1Q9NZ45 108 aaKnown RBP13.45□□□□□ -0.26
NUP50-204ENST00000417702 POU2F3Q9UKI9 436 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 RCE1Q9Y256 329 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 ALPK2Q86TB3 2170 aa13.45□□□□□ -0.26
NUP50-204ENST00000417702 SHISA9B4DS77 424 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 FXYD1O00168 92 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 WNT11O96014 354 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 PAX1P15863 534 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 CD40P25942 277 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 GZMMP51124 257 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 ATP5J2P56134 94 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 HMBOX1Q6NT76 420 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 ERICH5Q6P6B1 374 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 SLC22A25Q6T423 547 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 CCDC80Q76M96 950 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 SCAIQ8N9R8 606 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 ADPRHL1Q8NDY3 354 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 VANGL1Q8TAA9 524 aaPredicted RBP13.44□□□□□ -0.26
NUP50-204ENST00000417702 PROX1Q92786 737 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 GTPBP3Q969Y2 492 aaKnown RBP13.44□□□□□ -0.26
NUP50-204ENST00000417702 TRMT61AQ96FX7 289 aaKnown RBP13.44□□□□□ -0.26
NUP50-204ENST00000417702 C18orf12Q96KH6 178 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 Q96MF0 132 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 ALKBH3Q96Q83 286 aaPredicted RBP13.44□□□□□ -0.26
NUP50-204ENST00000417702 C1QTNF6Q9BXI9 259 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 LINC00470Q9BZP3 86 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 ALG2Q9H553 416 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 HEATR1Q9H583 2144 aaKnown RBP13.44□□□□□ -0.26
NUP50-204ENST00000417702 OBP2BQ9NPH6 170 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 SEC14L4Q9UDX3 406 aa13.44□□□□□ -0.26
NUP50-204ENST00000417702 SETD2Q9BYW2 2564 aaPredicted RBP13.44□□□□□ -0.26
NUP50-204ENST00000417702 LOC102725191A0A1B0GVB3 256 aa13.43□□□□□ -0.26
NUP50-204ENST00000417702 CPSF4LA6NMK7 179 aaKnown RBP13.43□□□□□ -0.26
NUP50-204ENST00000417702 CHP2O43745 196 aa13.43□□□□□ -0.26
NUP50-204ENST00000417702 SLC43A1O75387 559 aa13.43□□□□□ -0.26
NUP50-204ENST00000417702 UPK3AO75631 287 aa13.43□□□□□ -0.26
NUP50-204ENST00000417702 IFNA14P01570 189 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms