RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TGM3Q08188 693 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 CRMP1Q14194 572 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 OLFML2AQ68BL7 652 aa13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 MRPS30Q9NP92 439 aaKnown RBP13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 RPH3AQ9Y2J0 694 aaPredicted RBP13.53□□□□□ -0.24
NCKIPSD-204ENST00000416649 LINC01553A4QN01 128 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 THY1P04216 161 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 GTF2F2P13984 249 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 ITPKBP27987 946 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 TAS2R20P59543 309 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 SNRPD1P62314 119 aaKnown RBP13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 MESP2Q0VG99 397 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 IL10RAQ13651 578 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 PLEKHN1Q494U1 663 aaPredicted RBP13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 C9orf50Q5SZB4 431 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 PFN4Q8NHR9 129 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 PPP1R16AQ96I34 528 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 CD180Q99467 661 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 IER2Q9BTL4 223 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 IGFLR1Q9H665 355 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 GAREM1Q9H706 876 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 ST6GALNAC2Q9UJ37 374 aa13.52□□□□□ -0.24
NCKIPSD-204ENST00000416649 PTPRSQ13332 1948 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 PLXNB3Q9ULL4 1909 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 LAMA1P25391 3075 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 UNC119BA6NIH7 251 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 EIF4E2O60573 245 aaKnown RBP13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 GUCA2AQ02747 115 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 ZNF234Q14588 700 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR7A5Q15622 319 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 EIF2S3LQ2VIR3 472 aaKnown RBP13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 TCEAL5Q5H9L2 206 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 KHDRBS2Q5VWX1 349 aaKnown RBP13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 THSD4Q6ZMP0 1018 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 MBOAT2Q6ZWT7 520 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 EDARADDQ8WWZ3 215 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 GAL3ST1Q99999 423 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 JAM3Q9BX67 310 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 ADGRL4Q9HBW9 690 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 C2orf42Q9NWW7 574 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 COMMD9Q9P000 198 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 CACNA1IQ9P0X4 2223 aa13.52□□□□□ -0.25
NCKIPSD-204ENST00000416649 TRAV27A0A087WT01 109 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 A0A0D9SG52 128 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 FCMRO60667 390 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 OLFM2O95897 454 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 S100A8P05109 93 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 IL9P15248 144 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 CD53P19397 219 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 S100PP25815 95 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 DLSTP36957 453 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 SOX2P48431 317 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 JMJD6Q6NYC1 403 aaPredicted RBP13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 USP53Q70EK8 1073 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 KRT77Q7Z794 578 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 TRAPPC5Q8IUR0 188 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 ARMC10Q8N2F6 343 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 ZNF614Q8N883 585 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 ELP5Q8TE02 316 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 PELI1Q96FA3 418 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 LYSMD1Q96S90 227 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 PAPOLGQ9BWT3 736 aaKnown RBP13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 C1QTNF2Q9BXJ5 285 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 MEPEQ9NQ76 525 aaPredicted RBP13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 C20orf141Q9NUB4 165 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 FAM96BQ9Y3D0 163 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 ZNF337Q9Y3M9 751 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 A0A1W2PS29 197 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR5H14A6NHG9 310 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 IDSB3KWA1 339 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 ZNF879B4DU55 563 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 MAPK3P27361 379 aaPredicted RBP13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 HTRA4P83105 476 aaPredicted RBP13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 FOXK2Q01167 660 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 FABP9Q0Z7S8 132 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 PEA15Q15121 130 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 PRRT3Q5FWE3 981 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 C9orf64Q5T6V5 341 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 JAZF1Q86VZ6 243 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 GTPBP8Q8N3Z3 284 aaPredicted RBP13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR13C2Q8NGS9 318 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 SMIM19Q96E16 107 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 AMDHD1Q96NU7 426 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR51M1Q9H341 326 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 EPHA6Q9UF33 1036 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 OR5V1Q9UGF6 321 aa13.51□□□□□ -0.25
NCKIPSD-204ENST00000416649 RIIAD1A6NNX1 92 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 LY86O95711 162 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 CEBPBP17676 345 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 DPP4P27487 766 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 GRPRP30550 384 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 HABP2Q14520 560 aaPredicted RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 CDK5R1Q15078 307 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 DECR1Q16698 335 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PRAMEF14Q5SWL7 426 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 LIN54Q6MZP7 749 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 PWWP2BQ6NUJ5 590 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 STEAP2Q8NFT2 490 aa13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 SETD7Q8WTS6 366 aaKnown RBP13.5□□□□□ -0.25
NCKIPSD-204ENST00000416649 CNTNAP3BQ96NU0 1288 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms