RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SLC9A8Q9Y2E8 581 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 MRPS18CQ9Y3D5 142 aaKnown RBP13.15□□□□□ -0.3
SGCE-202ENST00000415788 CHST2Q9Y4C5 530 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 A0A087WZY1 265 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 MEIOCA2RUB1 952 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 PIPP12273 146 aaPredicted RBP13.14□□□□□ -0.31
SGCE-202ENST00000415788 GDF1P27539 372 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 RNF144AP50876 292 aaPredicted RBP13.14□□□□□ -0.31
SGCE-202ENST00000415788 DSCR4P56555 118 aaPredicted RBP13.14□□□□□ -0.31
SGCE-202ENST00000415788 PPIAP62937 165 aaKnown RBP13.14□□□□□ -0.31
SGCE-202ENST00000415788 PLAURQ03405 335 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 TBRG1Q3YBR2 411 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 NOXA1Q86UR1 476 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 ATCAYQ86WG3 371 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 TMEM251Q8N6I4 163 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 GPR32P1Q8NGA4 272 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 GON7Q9BXV9 100 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 SLC22A4Q9H015 551 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 ERVK13-1Q9NX77 482 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 LUZP4Q9P127 313 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 FAAHO00519 579 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 CTDSP2O14595 271 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 TFECO14948 347 aaPredicted RBP13.14□□□□□ -0.31
SGCE-202ENST00000415788 SSX4O60224 188 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 PGCP20142 388 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 SRD5A2P31213 254 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 IDH2P48735 452 aaKnown RBP13.14□□□□□ -0.31
SGCE-202ENST00000415788 CCR4P51679 360 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 ZNF41P51814 821 aaPredicted RBP13.14□□□□□ -0.31
SGCE-202ENST00000415788 CDC42P60953 191 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 PMP22Q01453 160 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 ALDH6A1Q02252 535 aaKnown RBP13.14□□□□□ -0.31
SGCE-202ENST00000415788 SCN1BQ07699 218 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 NDUFAF6Q330K2 333 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 SOWAHCQ53LP3 525 aaPredicted RBP13.14□□□□□ -0.31
SGCE-202ENST00000415788 YIF1BQ5BJH7 314 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 NXNL2Q5VZ03 156 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 TMPRSS11AQ6ZMR5 421 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 OR4C15Q8NGM1 316 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 C1GALT1C1Q96EU7 318 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 TAAR6Q96RI8 345 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 TAPBPLQ9BX59 468 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 ZDHHC11Q9H8X9 412 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 ZNF556Q9HAH1 456 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 DIABLOQ9NR28 239 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 DKKL1Q9UK85 242 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 HRH3Q9Y5N1 445 aa13.14□□□□□ -0.31
SGCE-202ENST00000415788 MGAQ8IWI9 3026 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 C17orf51A8MQB3 221 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 TPD52L2O43399 206 aaKnown RBP13.13□□□□□ -0.31
SGCE-202ENST00000415788 OIP5O43482 229 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 NUDT14O95848 222 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 RFPL3SP0C7P2 107 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 HSMCR30P0CW71 290 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 DPP4P27487 766 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 RFC3P40938 356 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 RFX2P48378 723 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 RORCP51449 518 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 RGS8P57771 180 aaPredicted RBP13.13□□□□□ -0.31
SGCE-202ENST00000415788 ASAH1Q13510 395 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 TSTQ16762 297 aaKnown RBP13.13□□□□□ -0.31
SGCE-202ENST00000415788 MICAQ29983 383 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 Q6ZPB1 254 aaPredicted RBP13.13□□□□□ -0.31
SGCE-202ENST00000415788 LIX1LQ8IVB5 337 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 TMEM234Q8WY98 164 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 SLC7A6Q92536 515 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 RNF170Q96K19 258 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 ARHGDIGQ99819 225 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 KCNS3Q9BQ31 491 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 RSPO3Q9BXY4 272 aaPredicted RBP13.13□□□□□ -0.31
SGCE-202ENST00000415788 AMBNQ9NP70 447 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 ACKR4Q9NPB9 350 aa13.13□□□□□ -0.31
SGCE-202ENST00000415788 TESQ9UGI8 421 aaKnown RBP13.13□□□□□ -0.31
SGCE-202ENST00000415788 FAM166BA8MTA8 275 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 B4DXG7 233 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 EPPINO95925 133 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 SCG5P05408 212 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 HPNP05981 417 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 IL7P13232 177 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 CHMP24386 653 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 MAGEA5P43359 124 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 NUDT6P53370 316 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 RUNX1T1Q06455 604 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 SLC10A1Q14973 349 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 MED22Q15528 200 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 GLYR1Q49A26 553 aaPredicted RBP13.12□□□□□ -0.31
SGCE-202ENST00000415788 IFI44LQ53G44 452 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 XKRXQ6PP77 449 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 RANBP3LQ86VV4 465 aaPredicted RBP13.12□□□□□ -0.31
SGCE-202ENST00000415788 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 GEMIN6Q8WXD5 167 aaKnown RBP13.12□□□□□ -0.31
SGCE-202ENST00000415788 ST8SIA1Q92185 356 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 ZBTB8AQ96BR9 441 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 ASPNQ9BXN1 380 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 SRRQ9GZT4 340 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 CLN6Q9NWW5 311 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 PAQR5Q9NXK6 330 aaPredicted RBP13.12□□□□□ -0.31
SGCE-202ENST00000415788 NDUFAF4Q9P032 175 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms