RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 TVP23AA6NH52 213 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 M0R129 80 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 ZGLP1P0C6A0 271 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 EPHA8P29322 1005 aaPredicted RBP11.02□□□□□ -0.65
PTPRF-205ENST00000414879 PTGER1P34995 402 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 MAN2A2P49641 1150 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 SSX6Q7RTT6 188 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 OR4N4Q8N0Y3 316 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF709Q8N972 641 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 SLCO5A1Q9H2Y9 848 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 CHST11Q9NPF2 352 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 PCOLCE2Q9UKZ9 415 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 B3GALT5Q9Y2C3 310 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 FXYD6-FXYD2A0A087WZ82 144 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 CCDC163A0A0D9SF12 145 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 IMPA2O14732 288 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 WDPCPO95876 746 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 AKAIN1P0CW23 69 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SYT6Q5T7P8 510 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 FCRLBQ6BAA4 426 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 Q6ZS52 159 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 PATE1Q8WXA2 126 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SARAFQ96BY9 339 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 FXYD6Q9H0Q3 95 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SLC25A37Q9NYZ2 338 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 HDGFL3Q9Y3E1 203 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 C13orf42A0A1B0GVH6 325 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 PRKRAO75569 313 aaKnown RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 CRTAPO75718 401 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 F13BP05160 661 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 CA5AP35218 305 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SOX3P41225 446 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 BDH1Q02338 343 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SMAD2Q15796 467 aaKnown RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 NIPAL3Q6P499 406 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 C1orf210Q8IVY1 113 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 MAML2Q8IZL2 1156 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF615Q8N8J6 731 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SPERTQ8NA61 448 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 BRIX1Q8TDN6 353 aaKnown RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 THOC3Q96J01 351 aaKnown RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 METTL9Q9H1A3 318 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 NRIP3Q9NQ35 241 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 PRDM7Q9NQW5 492 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 FBXL3Q9UKT7 428 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 ASB1Q9Y576 335 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 TMEM221A6NGB7 291 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 B4DXG7 233 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 K7EQS6 105 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 UPK1AO00322 258 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SURF4O15260 269 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF780AO75290 641 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 IFNGR1P15260 489 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 MMP11P24347 488 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 EFNA3P52797 238 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 FXYD6P3P58550 94 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 S100A10P60903 97 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF385BQ569K4 471 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 AGAP7PQ5VUJ5 663 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 CCBE1Q6UXH8 406 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 MARCH3Q86UD3 253 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SIMC1Q8NDZ2 872 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 OR4D9Q8NGE8 314 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 TXNDC15Q96J42 360 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 AGAP4Q96P64 663 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 SLC6A15Q9H2J7 730 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 TRDV1A0A1B0GX56 115 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 MEN1O00255 615 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 LYRM1O43325 122 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 BPNT1O95861 308 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 RAF1P04049 648 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 GALNSP34059 522 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 DLSTP36957 453 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 MFAP5Q13361 173 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 RUNX2Q13950 521 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF684Q5T5D7 378 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 PRAMEF20Q5VT98 475 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 GSG1LQ6UXU4 331 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 KCTD9Q7L273 389 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 NDUFAF7Q7L592 441 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 ENTHD1Q8IYW4 607 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 OR56B1Q8NGI3 324 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 TMEM255BQ8WV15 326 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 CMC2Q9NRP2 79 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 CEPT1Q9Y6K0 416 aa11.01□□□□□ -0.65
PTPRF-205ENST00000414879 FAM171A2A8MVW0 826 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 UPK1BO75841 260 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 MPIG6BO95866 241 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 SLC2A5P22732 501 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 HTR5AP47898 357 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 BIDP55957 195 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 GABREP78334 506 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 HES5Q5TA89 166 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 CNIH2Q6PI25 160 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 C16orf52Q8NHV5 167 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 CTRCQ99895 268 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 QRSL1Q9H0R6 528 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms