RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 BMP5P22003 454 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 HTR1EP28566 365 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 SHC1P29353 583 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 RYKP34925 604 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 SFTPDP35247 375 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 GCKP35557 465 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 PCP4P48539 62 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 LHX2P50458 406 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 ZNF41P51814 821 aaPredicted RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 MVDP53602 400 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 ATP12AP54707 1039 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 CLDN15P56746 228 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 DSTNP60981 165 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 HPCAP84074 193 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 FOXF1Q12946 379 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 FOXF2Q12947 444 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 RCAN2Q14206 197 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 SELPLGQ14242 412 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 MAPK11Q15759 364 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 ZNF630Q2M218 657 aaPredicted RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 PLPPR5Q32ZL2 321 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 BEAN1Q3B7T3 259 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 KLHL26Q53HC5 615 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 NHSL2Q5HYW2 709 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 FAM69AQ5T7M9 428 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 ATAD3BQ5T9A4 648 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 TMEM211Q6ICI0 200 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 HEPHL1Q6MZM0 1159 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 MTFR2Q6P444 385 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 AAGABQ6PD74 315 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 C16orf89Q6UX73 402 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 H1FNTQ75WM6 255 aaPredicted RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 VRK2Q86Y07 508 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 MSRB3Q8IXL7 192 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 GCNT2Q8N0V5 402 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 ZNF619Q8N2I2 560 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 C9orf106Q8NAJ2 232 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 MIPOL1Q8TD10 442 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 CA5BP1Q8WTZ4 195 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 PHF10Q8WUB8 498 aaKnown RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 RND1Q92730 232 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 MAL2Q969L2 176 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 NUDT16L1Q9BRJ7 211 aaKnown RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 FUZQ9BT04 418 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 CENPOQ9BU64 300 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 THUMPD3Q9BV44 507 aaKnown RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 SSBP3Q9BWW4 388 aaPredicted RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 ZNF350Q9GZX5 532 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 HOXD1Q9GZZ0 328 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 FAM107BQ9H098 131 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 SLC38A1Q9H2H9 487 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 IKZF5Q9H5V7 419 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 ZNF385DQ9H6B1 395 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 PTGES2Q9H7Z7 377 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 RMND5AQ9H871 391 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 TPT1P8Q9HAU6 139 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 SLC52A3Q9NQ40 469 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 KRT84Q9NSB2 600 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 MED17Q9NVC6 651 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 SLC25A37Q9NYZ2 338 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 COQ3Q9NZJ6 369 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 VAPAQ9P0L0 249 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 L3MBTL1Q9Y468 752 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 CACNA1DQ01668 2161 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 A0A096LPI6 279 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 IGLV3-32A0A0A0MS00 114 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 A0A1W2PP18 115 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 A0A1W2PQD3 144 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 H3BNH8 94 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 CLIC1O00299 241 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 AP3D1O14617 1153 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 TNFSF11O14788 317 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ANGPT2O15123 496 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ZNF264O43296 627 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 EFNA2O43921 213 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 KIAA0513O60268 411 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 FAM20BO75063 409 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 EPPINO95925 133 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 AK1P00568 194 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 CSTAP01040 98 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 IL6RP08887 468 aaPredicted RBP4.36□□□□□ -1.71
VPS41-205ENST00000414632 LINGO3P0C6S8 592 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 GKN3PP0CG01 181 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 GABRA1P14867 456 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ZNF708P17019 499 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 HOXB9P17482 250 aaPredicted RBP4.36□□□□□ -1.71
VPS41-205ENST00000414632 AQP1P29972 269 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 CHRNB4P30926 498 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 GRK5P34947 590 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 MRPL19P49406 292 aaKnown RBP4.36□□□□□ -1.71
VPS41-205ENST00000414632 ATP4BP51164 291 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 P2RX1P51575 399 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ZNF136P52737 540 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 MTPNP58546 118 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 SIRPAP78324 504 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 LRRC74AQ0VAA2 488 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 SKP2Q13309 424 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 ART3Q13508 389 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 CBFBQ13951 182 aa4.36□□□□□ -1.71
VPS41-205ENST00000414632 CAPRIN1Q14444 709 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms