RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TMEM239Q8WW34 195 aa15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 NINJ1Q92982 152 aa15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 GTPBP3Q969Y2 492 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 HRASLS5Q96KN8 279 aa15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 APOL4Q9BPW4 351 aa15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 ZNF426Q9BUY5 554 aa15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 CLEC4MQ9H2X3 399 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 PIGMQ9H3S5 423 aa15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 RASSF1Q9NS23 344 aa15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 UBAP1Q9NZ09 502 aa15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 NDRG4Q9ULP0 352 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 RPH3AQ9Y2J0 694 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-204ENST00000414057 ARHGAP21Q5T5U3 1957 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 HCRTR2O43614 444 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 ZIC3O60481 467 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 ADAM11O75078 769 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 GOSR1O95249 250 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 TNFAIP8O95379 198 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 GNAO1P09471 354 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 FPR3P25089 353 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 RYKP34925 604 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 STARP49675 285 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 AGFG1P52594 562 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 TSPAN31Q12999 210 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 SNTB1Q13884 538 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 DAZAP2Q15038 168 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 ZNF691Q5VV52 312 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 RAET1LQ5VY80 246 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 OR2A2Q6IF42 318 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 LINC00114Q6XXX2 140 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 P4HA3Q7Z4N8 544 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 THAP5Q7Z6K1 395 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 ZER1Q7Z7L7 766 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 CDK20Q8IZL9 346 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 CADM2Q8N3J6 435 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 FADS6Q8N9I5 356 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 GATSQ8NAP1 163 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 OR5W2Q8NH69 310 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 TMEM255BQ8WV15 326 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 ARSGQ96EG1 525 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 MUS81Q96NY9 551 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 SLC19A3Q9BZV2 496 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 DSN1Q9H410 356 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 JKAMPQ9P055 326 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 ICAM5Q9UMF0 924 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 MED31Q9Y3C7 131 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 GMPPBQ9Y5P6 360 aa15.17■□□□□ 0.02
SCAMP4-204ENST00000414057 A6NNC1 897 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 IGF2P01344 180 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 EPXP11678 715 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 POU2F1P14859 743 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 HK1P19367 917 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 SLC1A3P43003 542 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 OMPP47874 163 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 GSSP48637 474 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 CCR4P51679 360 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 CRISP1P54107 249 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 CLDN18P56856 261 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 NDUFAF6Q330K2 333 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 GLYR1Q49A26 553 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 CBLN3Q6UW01 205 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 OR2M3Q8NG83 312 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 B4GALNT2Q8NHY0 566 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 PIGQQ9BRB3 760 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 RBM24Q9BX46 236 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 YTHDF1Q9BYJ9 559 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 CLCF1Q9UBD9 225 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 AKAP9Q99996 3911 aa15.16■□□□□ 0.02
SCAMP4-204ENST00000414057 A0A087WUJ7 227 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 IGLV3-32A0A0A0MS00 114 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 FAM221AA4D161 298 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 CRHP06850 196 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 IDH2P48735 452 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 ART1P52961 327 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 CTBP2P56545 445 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 PRKCDQ05655 676 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 FOXD4Q12950 439 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 TTC33Q6PID6 262 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 NRMQ8IXM6 262 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 ZNF563Q8TA94 476 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 RNF217Q8TC41 542 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 DUSP19Q8WTR2 217 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 C3orf49Q96BT1 292 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 INTS12Q96CB8 462 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 MED11Q9P086 117 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 REV1Q9UBZ9 1251 aa15.15■□□□□ 0.02
SCAMP4-204ENST00000414057 KLF4O43474 513 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 OIP5O43482 229 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 LYNP07948 512 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 TCEA1P23193 301 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 GGT2P36268 569 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 HTR3AP46098 478 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 RPS3AP61247 264 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 FOXF2Q12947 444 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 WDR88Q6ZMY6 472 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 RASSF6Q6ZTQ3 369 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 TMPRSS11FQ6ZWK6 438 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 LUZP2Q86TE4 346 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 DEPDC4Q8N2C3 294 aa15.14■□□□□ 0.01
SCAMP4-204ENST00000414057 CLDN22Q8N7P3 220 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms