RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 CR2P20023 1033 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 FPR3P25089 353 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 ABHD17BQ5VST6 288 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 KDM8Q8N371 416 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 BORCS7Q96B45 105 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 AMDHD1Q96NU7 426 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 RAB9BQ9NP90 201 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 ZNF264O43296 627 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 CNOT4O95628 575 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 VASH1Q7L8A9 365 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 C19orf47Q8N9M1 422 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 ZFAND1Q8TCF1 268 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 ELOVL3Q9HB03 270 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 NRIP3Q9NQ35 241 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 CUTCQ9NTM9 273 aa12.75□□□□□ -0.37
SMARCA4-202ENST00000413806 A6NCN8 305 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 OTOL1A6NHN0 477 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 HLA-AP01891 365 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 LCN10Q6JVE6 187 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 IL20RBQ6UXL0 311 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 MRPL21Q7Z2W9 205 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 MISPQ8IVT2 679 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 FAM160A2Q8N612 972 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 MYEF2Q9P2K5 600 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 CSO75390 466 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 IRF2P14316 349 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 AFMIDQ63HM1 303 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 SIGIRRQ6IA17 410 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 DLEU7Q6UYE1 221 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 RFLNAQ6ZTI6 216 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 ABHD12BQ7Z5M8 362 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 LIX1LQ8IVB5 337 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 C1QTNF3Q9BXJ4 246 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 PURGQ9UJV8 347 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 OSGIN1Q9UJX0 560 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 PHIPQ8WWQ0 1821 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 F5H5K5 113 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 POLR2IP36954 125 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 ACTBL2Q562R1 376 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 RNF128Q8TEB7 428 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 MITD1Q8WV92 249 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 TXN2Q99757 166 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 ST6GALNAC5Q9BVH7 336 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 GABARAPL1Q9H0R8 117 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 SEMA4GQ9NTN9 838 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 HCFC2Q9Y5Z7 792 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 SCN7AQ01118 1682 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 OR2A25A4D2G3 310 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 NME2P22392 152 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 APLNRP35414 380 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 PSPHP78330 225 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 COX20Q5RI15 118 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 TMUB2Q71RG4 321 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 ZNF439Q8NDP4 499 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 C1GALT1Q9NS00 363 aa12.74□□□□□ -0.37
SMARCA4-202ENST00000413806 TMEM269A0A1B0GVZ9 245 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 SERINC4A6NH21 518 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 POLR2HP52434 150 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 SLC48A1Q6P1K1 146 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 DUSP19Q8WTR2 217 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 OR11A1Q9GZK7 315 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 GLIPR2Q9H4G4 154 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 ATP13A2Q9NQ11 1180 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 ASH2LQ9UBL3 628 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 ZFAND5O76080 213 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 BMP1P13497 986 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 FOXB2Q5VYV0 432 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 ETFRF1Q6IPR1 90 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 HIST2H3AQ71DI3 136 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 RCBTB1Q8NDN9 531 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 AMBRA1Q9C0C7 1298 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 OBP2AQ9NY56 170 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 MT-CO2P00403 227 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 MTHFD2P13995 350 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 EPHA1P21709 976 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 CD38P28907 300 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 ETV5P41161 510 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 SIRPAP78324 504 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 RNF212Q495C1 297 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 NIPAL3Q6P499 406 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 NLRC3Q7RTR2 1065 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 OR52N1Q8NH53 320 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 ANGPTL6Q8NI99 470 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 PHYHIPQ92561 330 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 SCGB2A1O75556 95 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 IGLV3-25P01717 112 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 APOA2P02652 100 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 PTBP1P26599 531 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 G0S2P27469 103 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 FABP6P51161 128 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 FXYD4P59646 89 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 PCBD1P61457 104 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 PLA2G7Q13093 441 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 LRRC26Q2I0M4 334 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 OTUD1Q5VV17 481 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 H3F3CQ6NXT2 135 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 NAA40Q86UY6 237 aa12.73□□□□□ -0.37
SMARCA4-202ENST00000413806 OR51Q1Q8NH59 317 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms