RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 FNDC8Q8TC99 324 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 CT55Q8WUE5 264 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 LGALS12Q96DT0 336 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 C7orf34Q96L11 122 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 HIST1H2AAQ96QV6 131 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 ERVK-18Q9QC07 812 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 TCFL5Q9UL49 500 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 SPEGQ15772 3267 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 IGKV1-8A0A0C4DH67 115 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 FAM240BA0A1B0GVZ2 78 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 C7orf72A4D263 438 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 FABP12A6NFH5 140 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 OR2J2O76002 312 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 MT-ND5P03915 603 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 RPL7P18124 248 aaKnown RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 MAPK3P27361 379 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 MAP2K6P52564 334 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 NUDT6P53370 316 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 PPP3R1P63098 170 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 PHC1P78364 1004 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 RASGEF1BQ0VAM2 473 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 TMEM176BQ3YBM2 270 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 TCTN3Q6NUS6 607 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 MBOAT2Q6ZWT7 520 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 SSX9Q7RTT3 188 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 SLC16A9Q7RTY1 509 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 SMIM15Q7Z3B0 74 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 PIWIL3Q7Z3Z3 882 aaKnown RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 GALNTL5Q7Z4T8 443 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 OR52E2Q8NGJ4 325 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 THEM6Q8WUY1 208 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 C10orf90Q96M02 699 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 FAM117AQ9C073 453 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 TPK1Q9H3S4 243 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 A0A087WZY1 265 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 A0A1W2PPL8 197 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 CRHBPP24387 322 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 VAMP2P63027 116 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 NFATC3Q12968 1075 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 C12orf45Q8N5I9 185 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 YIPF7Q8N8F6 280 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 COQ8AQ8NI60 647 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 NUBPLQ8TB37 319 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 LRR1Q96L50 414 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 MGLLQ99685 303 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 LHPPQ9H008 270 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 MOV10Q9HCE1 1003 aaKnown RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 FBXL4Q9UKA2 621 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 NOX1Q9Y5S8 564 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 A0A1W2PQM1 296 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 CYR61O00622 381 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 FOXS1O43638 330 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 HPP00738 406 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 MT-ATP6P00846 226 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 CHRM4P08173 479 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 ABOP16442 354 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 CFL1P23528 166 aaKnown RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 EVI2BP34910 448 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 SLC1A3P43003 542 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 EEF1A1P68104 462 aaKnown RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 TEKQ02763 1124 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 SPHARQ15513 63 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 AARDQ4LEZ3 155 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 FAM205BPQ63HN1 556 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 LANCL3Q6ZV70 420 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 PM20D2Q8IYS1 436 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 PARP8Q8N3A8 854 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 OR6N2Q8NGY6 317 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 FAR1Q8WVX9 515 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 NOTCH4Q99466 2003 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 BARD1Q99728 777 aaKnown RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 SRA1Q9HD15 236 aaKnown RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 BIN3Q9NQY0 253 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 GPR171O14626 319 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 TFAP2AP05549 437 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 NR4A1P22736 598 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 CSF2RBP32927 897 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 EIF1AXP47813 144 aaKnown RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 GRB2P62993 217 aaKnown RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 PPP2R2BQ00005 443 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 TGFBR3Q03167 851 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 IL18Q14116 193 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 SGCAQ16586 387 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 FCRLBQ6BAA4 426 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 PTOV1Q86YD1 416 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 TCTE3Q8IZS6 198 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 M1APQ8TC57 530 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 TNFAIP8L1Q8WVP5 186 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 NANOS1Q8WY41 292 aaKnown RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 TBX5Q99593 518 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 FUNDC2Q9BWH2 189 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 OR52D1Q9H346 318 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 TRAV17A0A0B4J275 112 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 C13orf42A0A1B0GVH6 325 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 OR6C70A6NIJ9 312 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 FCMRO60667 390 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 SULT1C4O75897 302 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 IFNA21P01568 189 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 SLC6A9P48067 706 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 TBCEQ15813 527 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms