RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 Q6ZN92 141 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 NLRP9Q7RTR0 991 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 ADM2Q7Z4H4 148 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 TPRA1Q86W33 373 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 LRRC52Q8N7C0 313 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 MINDY2Q8NBR6 621 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 GMCL1P1Q8NEA9 526 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 OR2G3Q8NGZ4 309 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 EXOC6Q8TAG9 804 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 PNPT1Q8TCS8 783 aaKnown RBP0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 TCTEX1D2Q8WW35 142 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 NCLNQ969V3 563 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 ITCHQ96J02 903 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 STACQ99469 402 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 MRPL45Q9BRJ2 306 aaKnown RBP0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 TBCDQ9BTW9 1192 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZNF717Q9BY31 904 aaPredicted RBP0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 ACTR6Q9GZN1 396 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 YY1AP1Q9H869 796 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 CTPS2Q9NRF8 586 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 YAE1D1Q9NRH1 226 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 AGPAT5Q9NUQ2 364 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 AATFQ9NY61 560 aaKnown RBP eCLIP0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 CHTOPQ9Y3Y2 248 aaKnown RBP0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 TMEM14AQ9Y6G1 99 aa0.25□□□□□ -2.37
RNU2-55P-201ENST00000411146 COL6A6A6NMZ7 2263 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 PSMA7O14818 248 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 SLC31A2O15432 143 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 RS1O15537 224 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 UGT1A9O60656 530 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 KINO60870 393 aaKnown RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 RHOBTB1O94844 696 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 GOSR1O95249 250 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 IGHV1-8P0DP01 117 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 DAP3P51398 398 aaKnown RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 OSTNP61366 133 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 SLC7A9P82251 487 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 ACVR1Q04771 509 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 PRKCDQ05655 676 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 GABPB1Q06547 395 aaPredicted RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 SNX1Q13596 522 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZNF235Q14590 738 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 SNRNP35Q16560 246 aaKnown RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 TTLL9Q3SXZ7 439 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 PRMT9Q6P2P2 845 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 CBLN3Q6UW01 205 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 TMEM205Q6UW68 189 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 CES3Q6UWW8 571 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 UNQ9165/PRO28630Q6UXU0 137 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 TMEM136Q6ZRR5 245 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 VPS36Q86VN1 386 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 VSTM4Q8IW00 320 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 OR2L13Q8N349 312 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 C1orf64Q8NEQ6 169 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 URGCPQ8TCY9 931 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 NAP1L3Q99457 506 aaPredicted RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 RIOK2Q9BVS4 552 aaKnown RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 DHX33Q9H6R0 707 aaKnown RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 UGT1A7Q9HAW7 530 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 UGT1A10Q9HAW8 530 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 UGT1A8Q9HAW9 530 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 FBXO6Q9NRD1 293 aaPredicted RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 GPATCH2LQ9NWQ4 482 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 TRIM10Q9UDY6 481 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 CD84Q9UIB8 345 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 FOXJ3Q9UPW0 622 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 PSG8Q9UQ74 426 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 SIGLEC7Q9Y286 467 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 STRAPQ9Y3F4 350 aaKnown RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 ALG6Q9Y672 507 aa0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 AHDC1Q5TGY3 1603 aaPredicted RBP0.24□□□□□ -2.37
RNU2-55P-201ENST00000411146 IGKV1D-13A0A0B4J2D9 117 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 G3V4G9 280 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 OVOL1O14753 267 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 SOCS1O15524 211 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 TAPBPO15533 448 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 CHST1O43916 411 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 UGT2B17O75795 530 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 MBD3O95983 291 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 IGLV6-57P01721 117 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZDHHC11BP0C7U3 371 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 IGKV1-13P0DP09 117 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 TPSB2P20231 275 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 PAICSP22234 425 aaKnown RBP0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 TGFBR2P37173 567 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 OPRK1P41145 380 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 NUMBP49757 651 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 RPS11P62280 158 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 IRX3P78415 501 aaPredicted RBP0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 CYTH1Q15438 398 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 TPSAB1Q15661 275 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 RABL6Q3YEC7 729 aaPredicted RBP0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 PARP15Q460N3 678 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 TP53I3Q53FA7 332 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 HES5Q5TA89 166 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 TMEM225Q6GV28 225 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 TAF8Q7Z7C8 310 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 SNX32Q86XE0 403 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 CCDC170Q8IYT3 715 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZADH2Q8N4Q0 377 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms