RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ZNF385AQ96PM9 386 aaKnown RBP12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 DHRS9Q9BPW9 319 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 TRAF4Q9BUZ4 470 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 GSX1Q9H4S2 264 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 ZNF385DQ9H6B1 395 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 A0A087WUJ7 227 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 A0A1B0GWA3 101 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 RPL36A-HNRNPH2H7BZ11 118 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 H7C1Q1 480 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 AKAP8O43823 692 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 MFN2O95140 757 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 TTKP33981 857 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 RPS5P46782 204 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 CDH11P55287 796 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 CYLC2Q14093 348 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 COQ5Q5HYK3 327 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 DHDDSQ86SQ9 333 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 PATL1Q86TB9 770 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 EPHX4Q8IUS5 362 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 FAM169BQ8N8A8 192 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 SCAIQ8N9R8 606 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 KBTBD8Q8NFY9 601 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 SLC25A36Q96CQ1 311 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 ADAD1Q96M93 576 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 CGREF1Q99674 301 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 CPPED1Q9BRF8 314 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 PTDSS2Q9BVG9 487 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 NPAP1Q9NZP6 1156 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 FBXO9Q9UK97 447 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 POU2F3Q9UKI9 436 aa12.75□□□□□ -0.37
NIF3L1-205ENST00000409588 A0A0G2JND7 137 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 TPST1O60507 370 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 LGI1O95970 557 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 TROVE2P10155 538 aaKnown RBP eCLIP12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 ZNF83P51522 516 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 PCBP3P57721 371 aaKnown RBP12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 RGS8P57771 180 aaPredicted RBP12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 DSCR9P59020 149 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 CHRNB3Q05901 458 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 LTBQ06643 244 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 C1DQ13901 141 aaKnown RBP12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 OR1Q1Q15612 314 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 CYP51A1Q16850 503 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 CLEC12BQ2HXU8 276 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 HMBOX1Q6NT76 420 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 ANKRD16Q6P6B7 361 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 ZNF613Q6PF04 617 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 FBXL14Q8N1E6 418 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 KTI12Q96EK9 354 aaPredicted RBP12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 TMEM43Q9BTV4 400 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 IKZF5Q9H5V7 419 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 KAT8Q9H7Z6 458 aaKnown RBP12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 NPHS2Q9NP85 383 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 CBLN4Q9NTU7 201 aa12.74□□□□□ -0.37
NIF3L1-205ENST00000409588 A0A0B4J2E0 115 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 A0A1B0GX12 115 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 M0QX08 132 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 M0R1B8 84 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 SLC43A1O75387 559 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 ZNF432O94892 652 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 MT-ATP6P00846 226 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 CD8AP01732 235 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 HOXB4P17483 251 aaPredicted RBP12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 APOBEC3AP31941 199 aaPredicted RBP12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 UBE2NP61088 152 aaKnown RBP12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 HOXC5Q00444 222 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 NFYCQ13952 458 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 NIPAL3Q6P499 406 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 SNX32Q86XE0 403 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 C10orf111Q8N326 155 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 MUC15Q8N387 334 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 PIK3C3Q8NEB9 887 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 TAAR8Q969N4 342 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 SLC41A3Q96GZ6 507 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 LRR1Q96L50 414 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 HS6ST2Q96MM7 605 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 ASPNQ9BXN1 380 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 PRR14LQ5THK1 2151 aa12.73□□□□□ -0.37
NIF3L1-205ENST00000409588 ARPC4-TTLL3A0A0A6YYG9 625 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 VSTM5A8MXK1 200 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 E7EQL1 145 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 LY6G6DO95868 133 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 HTR2AP28223 471 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 SELENOPP49908 381 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 FABP6P51161 128 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 FOXG1P55316 489 aaPredicted RBP12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 DMTNQ08495 405 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 MAPRE2Q15555 327 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 LINC00114Q6XXX2 140 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 PTOV1Q86YD1 416 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 GPR137CQ8N3F9 429 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 IL17RDQ8NFM7 739 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 OR1K1Q8NGR3 316 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 SLC26A7Q8TE54 656 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 BCL2L2Q92843 193 aaPredicted RBP12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 NEUROG1Q92886 237 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 MPP4Q96JB8 637 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 RSPO3Q9BXY4 272 aaPredicted RBP12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 NOX1Q9Y5S8 564 aa12.72□□□□□ -0.37
NIF3L1-205ENST00000409588 PMF1-BGLAPU3KQ54 211 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms