RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TMEM91Q6ZNR0 172 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 ZBTB44Q8NCP5 570 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 AP3S1Q92572 193 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 ULBP3Q9BZM4 244 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 KCNN2Q9H2S1 579 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 GALNT9Q9HCQ5 603 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 MYOTQ9UBF9 498 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 PCDHGB6Q9Y5F9 930 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 PCNX3Q9H6A9 2034 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 A8MVM7 634 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 FAM171A2A8MVW0 826 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 LOC110117498-PIK3R3F6TDL0 507 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 TXNDC12O95881 172 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 MT-ATP6P00846 226 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 GTF2E2P29084 291 aaKnown RBP18.77■□□□□ 0.6
USP39-203ENST00000409470 KRR1Q13601 381 aaKnown RBP18.77■□□□□ 0.6
USP39-203ENST00000409470 LAX1Q8IWV1 398 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 OR5J2Q8NH18 312 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 RHBDD1Q8TEB9 315 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 SNX33Q8WV41 574 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 TSPAN32Q96QS1 320 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 ALG12Q9BV10 488 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 DEFB126Q9BYW3 111 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 TBCCD1Q9NVR7 557 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 KLRF1Q9NZS2 232 aa18.77■□□□□ 0.6
USP39-203ENST00000409470 ANKUB1A6NFN9 424 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 C9J4A7 227 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 C11orf98E9PRG8 122 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 PLPP2O43688 288 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 HTR3AP46098 478 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 TMED10P49755 219 aaKnown RBP18.76■□□□□ 0.59
USP39-203ENST00000409470 SLC25A1P53007 311 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 CAV3P56539 151 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 E2F1Q01094 437 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 FAM69AQ5T7M9 428 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 C1orf140Q5VVS0 124 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 RPTNQ6XPR3 784 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 FAM83FQ8NEG4 500 aaPredicted RBP18.76■□□□□ 0.59
USP39-203ENST00000409470 TTC9Q92623 222 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 PTDSS2Q9BVG9 487 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 DMDP11532 3685 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 EXPH5Q8NEV8 1989 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 FRYLO94915 3013 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 OR2J2O76002 312 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 GP1BAP07359 652 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 GAAP10253 952 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 CD53P19397 219 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 F8A1P23610 371 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 GPR139Q6DWJ6 353 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 PLEKHG7Q6ZR37 379 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 LYSMD2Q8IV50 215 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 MINDY2Q8NBR6 621 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 SLC22A8Q8TCC7 542 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 ASB15Q8WXK1 588 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 RELTQ969Z4 430 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 TSSK2Q96PF2 358 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 POLE4Q9NR33 117 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 SLC39A1Q9NY26 324 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 MED11Q9P086 117 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 ZNF346Q9UL40 294 aaKnown RBP18.76■□□□□ 0.59
USP39-203ENST00000409470 PTRH2Q9Y3E5 179 aaKnown RBP18.76■□□□□ 0.59
USP39-203ENST00000409470 GRIP1Q9Y3R0 1128 aa18.76■□□□□ 0.59
USP39-203ENST00000409470 ISPDA4D126 451 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 H7C1C5 153 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 MAGEB4O15481 346 aaPredicted RBP18.75■□□□□ 0.59
USP39-203ENST00000409470 AHSA1O95433 338 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 ACVR1BP36896 505 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 LCN6P62502 163 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 DNASE1L3Q13609 305 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 TRAM1Q15629 374 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 BTBD16Q32M84 506 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 ZNF528Q3MIS6 628 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 MESTQ5EB52 335 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 STEAP3Q658P3 488 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 BICRALQ6AI39 1079 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 LYPD4Q6UWN0 246 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 STK35Q8TDR2 534 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 ST8SIA1Q92185 356 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 MRPL48Q96GC5 212 aaKnown RBP18.75■□□□□ 0.59
USP39-203ENST00000409470 OR11A1Q9GZK7 315 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 SRA1Q9HD15 236 aaKnown RBP18.75■□□□□ 0.59
USP39-203ENST00000409470 ABCB9Q9NP78 766 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 TAS2R5Q9NYW4 299 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 MOKQ9UQ07 419 aa18.75■□□□□ 0.59
USP39-203ENST00000409470 NPIPB7O75200 414 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 RENP00797 406 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 AHCYP23526 432 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 ACP1P24666 158 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 CCKBRP32239 447 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 GBX2P52951 348 aaPredicted RBP18.74■□□□□ 0.59
USP39-203ENST00000409470 SUMO3P55854 103 aaPredicted RBP18.74■□□□□ 0.59
USP39-203ENST00000409470 SGCBQ16585 318 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 LINC01590Q5TEZ4 76 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 SLC22A16Q86VW1 577 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 SYS1Q8N2H4 156 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 NLGN4YQ8NFZ3 816 aaPredicted RBP18.74■□□□□ 0.59
USP39-203ENST00000409470 WDFY2Q96P53 400 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 MARCH7Q9H992 704 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 GNG8Q9UK08 70 aa18.74■□□□□ 0.59
USP39-203ENST00000409470 TEX51A0A1B0GUA7 166 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms