RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 TMEM100Q9NV29 134 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 KLF13Q9Y2Y9 288 aaPredicted RBP23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 NKX6-3A6NJ46 265 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 P2RX1P51575 399 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 TMEM38AQ9H6F2 299 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 GLB1P16278 677 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 APOBEC1P41238 236 aaKnown RBP23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 CAPZBP47756 277 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 ZNF583Q96ND8 569 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 TNFSF15O95150 251 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 RPL34P49207 117 aaKnown RBP23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 TAS2R46P59540 309 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 CMPK2Q5EBM0 449 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 ESPNLQ6ZVH7 1005 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 ETFBKMTQ8IXQ9 262 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 ABHD11Q8NFV4 315 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 TMEM255BQ8WV15 326 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 HSD17B8Q92506 261 aa23.15■■□□□ 1.3
SPIRE1-202ENST00000409402 HEXAP06865 529 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 BDKRB2P30411 391 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 SF3A2Q15428 464 aaKnown RBP23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 Q6ZNB5 142 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 PHC2Q8IXK0 858 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 SLC16A11Q8NCK7 471 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 MAFIPQ8WZ33 124 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 CENPOQ9BU64 300 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 B3GAT1Q9P2W7 334 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 KRBA1A5PL33 1030 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 NSA2O95478 260 aaKnown RBP23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 CXADRP78310 365 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 OR8B8Q15620 311 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 SLC43A2Q8N370 569 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 WDSUB1Q8N9V3 476 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 OR56B1Q8NGI3 324 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 SNX18Q96RF0 628 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 ZNF649Q9BS31 505 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 C20orf27Q9GZN8 174 aa23.14■■□□□ 1.3
SPIRE1-202ENST00000409402 A0A1B0GV50 99 aa23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 RAB40ALP0C0E4 278 aa23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 TAS2R19P59542 299 aa23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 TBCEQ15813 527 aaPredicted RBP23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 RAB40AQ8WXH6 277 aa23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 BORCS7Q96B45 105 aa23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 C7orf50Q9BRJ6 194 aaKnown RBP23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 HYAL4Q2M3T9 481 aa23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 H1FNTQ75WM6 255 aaPredicted RBP23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 GIMAP5Q96F15 307 aa23.14■■□□□ 1.29
SPIRE1-202ENST00000409402 CEBPZOSA8MTT3 80 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 SEC14L2O76054 403 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 IGFBP6P24592 240 aaPredicted RBP23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 MSMO1Q15800 293 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 TMEM196Q5HYL7 178 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 EHFQ9NZC4 300 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 LRRC30A6NM36 301 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 IGLV3-25P01717 112 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 CCR2P41597 374 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 LTC4SQ16873 150 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 RETREG3Q86VR2 466 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 OR13C9Q8NGT0 318 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 MKRN2Q9H000 416 aaKnown RBP23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 ANKRD34BA5PLL1 514 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 UBFD1O14562 309 aaKnown RBP23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 PGFP49763 221 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 UBE2NLQ5JXB2 153 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 UNKLQ9H9P5 680 aaKnown RBP23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 H3BMQ9 156 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 GABRPO00591 440 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 GAPDHSO14556 408 aaPredicted RBP23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 HLA-DMAP28067 261 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 EPHA5P54756 1037 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 FOXK2Q01167 660 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 S100A7AQ86SG5 101 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 ASIC5Q9NY37 505 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 PRAMEF27A3QJZ7 478 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 H0YIG0 161 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 CATR1Q13166 79 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 PRAMEF9Q5VWM5 478 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 BOD1Q96IK1 185 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 HYLS1Q96M11 299 aa23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 TSNAXQ99598 290 aaKnown RBP23.13■■□□□ 1.29
SPIRE1-202ENST00000409402 CACNA1SQ13698 1873 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 ARPC1BO15143 372 aaKnown RBP23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 ADAM23O75077 832 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 EMX1Q04741 257 aaPredicted RBP23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 NXNL2Q5VZ03 156 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 ZC3HAV1LQ96H79 300 aaKnown RBP23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 DUSP22Q9NRW4 184 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 TMEM221A6NGB7 291 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 GFYI3L273 518 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 CR2P20023 1033 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 SLC15A4Q8N697 577 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 HIPK2Q9H2X6 1198 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 GNG12Q9UBI6 72 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 DSCR3O14972 297 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 HPGDSO60760 199 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 CD14P08571 375 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 KMT5CQ86Y97 462 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 GTPBP8Q8N3Z3 284 aaPredicted RBP23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 OR5T1Q8NG75 326 aa23.12■■□□□ 1.29
SPIRE1-202ENST00000409402 OR1N1Q8NGS0 311 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms