RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 OR10R2Q8NGX6 335 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 ABHD4Q8TB40 342 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 PAQR8Q8TEZ7 354 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF384Q8TF68 577 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 INTS12Q96CB8 462 aaKnown RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 MAP6Q96JE9 813 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 ABHD6Q9BV23 337 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 GABARAPL3Q9BY60 117 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 PLK3Q9H4B4 646 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 BCO1Q9HAY6 547 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 SLC25A19Q9HC21 320 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 DNMT3BQ9UBC3 853 aaKnown RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 GLAP06280 429 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF888P0CJ79 500 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 SFTPDP35247 375 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 VASPP50552 380 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 RAC1P63000 192 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 EVX2Q03828 476 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 TNK1Q13470 666 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 EXT1Q16394 746 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 NPSR1Q6W5P4 371 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 Q8N9G6 341 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 M1APQ8TC57 530 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 BOD1Q96IK1 185 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 FAM71F1Q96KD3 344 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 LURAP1Q96LR2 239 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF582Q96NG8 517 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 OR5B2Q96R09 309 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 VN1R3Q9BXE9 311 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 SOX17Q9H6I2 414 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 SLC17A5Q9NRA2 495 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 EMCNQ9ULC0 261 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 EMC9Q9Y3B6 208 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 DCDC2BA2VCK2 349 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF860A6NHJ4 632 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 TARM1B6A8C7 271 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 CLN5O75503 358 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 EIF4EP06730 217 aaKnown RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 SNRNP70P08621 437 aaKnown RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 ANXA7P20073 488 aaKnown RBP5.67□□□□□ -1.5
SCN1A-203ENST00000409050 KIAA1024LP59773 190 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 KDM4DQ6B0I6 523 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 TCTE3Q8IZS6 198 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 KLHDC1Q8N7A1 406 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 GPR26Q8NDV2 337 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 OR51A4Q8NGJ6 313 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 SLC7A6Q92536 515 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 NEIL2Q969S2 332 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 SLC39A13Q96H72 371 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 TOX2Q96NM4 488 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 ST6GALNAC5Q9BVH7 336 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 MMP28Q9H239 520 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 GCM1Q9NP62 436 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 PRSS16Q9NQE7 514 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 RHBDD3Q9Y3P4 386 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 B3GALT1Q9Y5Z6 326 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 HS3ST3A1Q9Y663 406 aa5.67□□□□□ -1.5
SCN1A-203ENST00000409050 PIK3C2AO00443 1686 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR2A25A4D2G3 310 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SPINT2O43291 252 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SLC16A7O60669 478 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 HOXA11P31270 313 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 EPHA4P54764 986 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 FXYD4P59646 89 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 TAF9Q16594 264 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 GATSQ8NAP1 163 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 GJC3Q8NFK1 279 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ARRDC2Q8TBH0 407 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 MUCL1Q96DR8 90 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 MOCOSQ96EN8 888 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 MSLNLQ96KJ4 702 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ALG12Q9BV10 488 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 TUBG2Q9NRH3 451 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 UFSP2Q9NUQ7 469 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 CNIH4Q9P003 139 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR52A1Q9UKL2 312 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 FZD1Q9UP38 647 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 MRPS28Q9Y2Q9 187 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 CSNK1G3Q9Y6M4 447 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 A8MU76 341 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF814B7Z6K7 855 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 LGALS8O00214 317 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 STK17BO94768 372 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 RAB6AP20340 208 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 DUSP1P28562 367 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 APOBEC1P41238 236 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 GP2P55259 537 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 TPBGQ13641 420 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 COX19Q49B96 90 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 NHSL2Q5HYW2 709 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ATPAF1Q5TC12 328 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR10K2Q6IF99 312 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 RNF165Q6ZSG1 346 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SLC39A11Q8N1S5 342 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 PELI3Q8N2H9 469 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SDR9C7Q8NEX9 313 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR52R1Q8NGF1 315 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR52E1Q8NGJ3 308 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR4A16Q8NH70 328 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 APH1BQ8WW43 257 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms