RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 IRF4Q15306 451 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 TPRG1Q6ZUI0 275 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 OR52L1Q8NGH7 329 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 OR51S1Q8NGJ8 323 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 RAB3CQ96E17 227 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 TMEM231Q9H6L2 316 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 NOX4Q9NPH5 578 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 SLC13A4Q9UKG4 626 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 NPIPB15A6NHN6 443 aaPredicted RBP20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 PPM1DO15297 605 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 CD2P06729 351 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 MRPL3P09001 348 aaKnown RBP20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 RD3LP0DJH9 198 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 CTGFP29279 349 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 SIRPAP78324 504 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 RBM39Q14498 530 aaKnown RBP20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 ZNF234Q14588 700 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 TAF13Q15543 124 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 PNLIPRP3Q17RR3 467 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 MST1LQ2TV78 715 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 BEX5Q5H9J7 111 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 DNLZQ5SXM8 178 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 LIPNQ5VXI9 398 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 OR10K2Q6IF99 312 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 GPR142Q7Z601 462 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 INO80EQ8NBZ0 244 aaPredicted RBP20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 UBE2E3Q969T4 207 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 SMAD5Q99717 465 aaKnown RBP20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 OR52D1Q9H346 318 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 POFUT1Q9H488 388 aa20.52■□□□□ 0.88
CUEDC1-202ENST00000407144 CDC42EP2O14613 210 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 OIP5O43482 229 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 XRCC3O43542 346 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 PPP1R3DO95685 299 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 IFNA10P01566 189 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 NPPBP16860 134 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 HLA-GP17693 338 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 SLC2A5P22732 501 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 ACTA2P62736 377 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 RPS15P62841 145 aaKnown RBP20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 ACTG2P63267 376 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 TLE2Q04725 743 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 C16orf59Q7L2K0 433 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 TM4SF18Q96CE8 201 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 ZCCHC2Q9C0B9 1178 aaKnown RBP20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 RHOFQ9HBH0 211 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 GXYLT2A0PJZ3 443 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 IDSB3KWA1 339 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 PIN1P1O15428 100 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 IGSF6O95976 241 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 FGBP02675 491 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 CPT2P23786 658 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 MPIP34949 423 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 TRHRP34981 398 aaPredicted RBP20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 RBM34P42696 430 aaKnown RBP20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 PSEN2P49810 448 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 SSBP1Q04837 148 aaKnown RBP20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 BAP18Q8IXM2 172 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 RASGEF1AQ8N9B8 481 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 PELI1Q96FA3 418 aa20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 ELF4Q99607 663 aaPredicted RBP20.51■□□□□ 0.87
CUEDC1-202ENST00000407144 TRIP12Q14669 1992 aaPredicted RBP20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 UNC119BA6NIH7 251 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 SFTA3P0C7M3 94 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 FAM157CP0CG43 387 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 AVPR2P30518 371 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 GLP1RP43220 463 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 SCAND1P57086 179 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 FUT5Q11128 374 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 SSX6Q7RTT6 188 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 OLIG3Q7RTU3 272 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 ARL6IP6Q8N6S5 226 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 OR10H5Q8NGA6 315 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 ING5Q8WYH8 240 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 SAT2Q96F10 170 aaPredicted RBP20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 FAM83CQ9BQN1 747 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 POT1Q9NUX5 634 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 ASF1AQ9Y294 204 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 PCDHGA1Q9Y5H4 931 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 TIMM10BQ9Y5J6 103 aa20.5■□□□□ 0.87
CUEDC1-202ENST00000407144 MFNGO00587 321 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 PAPLNO95428 1278 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 CD14P08571 375 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 GABRR2P28476 465 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 RGS8P57771 180 aaPredicted RBP20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 ALKBH1Q13686 389 aaKnown RBP20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 HMGN3Q15651 99 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 LRRTM1Q86UE6 522 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 LRRTM4Q86VH4 590 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 TTC9BQ8N6N2 239 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 AKR7LQ8NHP1 331 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 NUDCD2Q8WVJ2 157 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 SLC25A21Q9BQT8 299 aaPredicted RBP20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 LAT2Q9GZY6 243 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 MYO10Q9HD67 2058 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 TRBV2A0A0J9YWF9 115 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 RNASEK-C17orf49H0YIS7 233 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 SLC2A1P11166 492 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 RAB5AP20339 215 aa20.49■□□□□ 0.87
CUEDC1-202ENST00000407144 NDUFS1P28331 727 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms