RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 EFNB2P52799 333 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 HADHBP55084 474 aaKnown RBP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 TNNC1P63316 161 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 MRPS25P82663 173 aaKnown RBP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 VLDLRP98155 873 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF154Q13106 437 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 ELAVL3Q14576 367 aaKnown RBP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 SNRNP35Q16560 246 aaKnown RBP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 HSP90B2PQ58FF3 399 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 C8orf74Q6P047 294 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 VITQ6UXI7 678 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 Q6ZTC4 211 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 UTS2BQ765I0 119 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 PEX26Q7Z412 305 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 NT5DC3Q86UY8 548 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC47A2Q86VL8 602 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 TPRA1Q86W33 373 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 SERPINA9Q86WD7 417 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 IFT20Q8IY31 132 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 FAM71AQ8IYT1 594 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 UBE2J2Q8N2K1 259 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 METTL13Q8N6R0 699 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 OR56B2PQ8NGI1 322 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 OR9A4Q8NGU2 314 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 ITLN1Q8WWA0 313 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 MRPS31Q92665 395 aaKnown RBP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 NT5C3BQ969T7 300 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 IFT74Q96LB3 600 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 NIPSNAP3BQ9BS92 247 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 SMYD3Q9H7B4 428 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 TM9SF3Q9HD45 589 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 XPNPEP1Q9NQW7 623 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC17A5Q9NRA2 495 aa3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 PNO1Q9NRX1 252 aaKnown RBP3.76□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF646O15015 1829 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 IGKV6D-21A0A0A0MT36 114 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 IGHV2-70DA0A0C4DH43 119 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF840PA6NDX5 716 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 FAM47DPA6NHR8 397 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF233A6NK53 670 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 SHISA9B4DS77 424 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 E7ESA3 106 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 E9PLD3 99 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 E9PQ18 207 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 GOLGA8SH3BPF8 625 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 PGRMC1O00264 195 aaKnown RBP3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 RAD51CO43502 376 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 EFNA2O43921 213 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 GALR3O60755 368 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 WBP4O75554 376 aaKnown RBP3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 IGHV3-13P01766 116 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 ALPIP09923 528 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 BCL3P20749 454 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 CD80P33681 288 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 RPL13AP40429 203 aaKnown RBP3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 P2RY1P47900 373 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 CYP24A1Q07973 514 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 KCNJ11Q14654 390 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 KCTD21Q4G0X4 260 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 LEMD1Q68G75 181 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZYG11AQ6WRX3 759 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF600Q6ZNG1 722 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 TRPM8Q7Z2W7 1104 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 IQCKQ8N0W5 287 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 GPD1LQ8N335 351 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 MREGQ8N565 214 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 CSNK1A1LQ8N752 337 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 FBXL13Q8NEE6 735 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 TCTEX1D2Q8WW35 142 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 IFT81Q8WYA0 676 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 CCDC127Q96BQ5 260 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 EFHD2Q96C19 240 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 PPP1R16AQ96I34 528 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF599Q96NL3 588 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 CITED1Q99966 193 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 CCDC77Q9BR77 488 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC35A5Q9BS91 424 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 MAGT1Q9H0U3 335 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 GOLPH3Q9H4A6 298 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 MCCC2Q9HCC0 563 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 RAB18Q9NP72 206 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 CUTCQ9NTM9 273 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 RAB20Q9NX57 234 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 CA5BQ9Y2D0 317 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 STYXL1Q9Y6J8 313 aa3.75□□□□□ -1.81
HMGB3P18-201ENST00000406327 IGSF9BQ9UPX0 1349 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 GSTTP1A0A1W2PQM5 241 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 HELTA6NFD8 242 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 MIF4GDA9UHW6 222 aaKnown RBP3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 GOLGA8KD6RF30 607 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 RHBDL1O75783 438 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 TSPAN12O95859 305 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 HPP00738 406 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 CA1P00915 261 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 SERPINA3P01011 423 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 PIGRP01833 764 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 IGHG3P01860 377 aa3.74□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC2A3P11169 496 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms