RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 FOXRED1Q96CU9 486 aaPredicted RBP14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 SAMD8Q96LT4 415 aa14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 ZFP3Q96NJ6 502 aa14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 PRAP1Q96NZ9 151 aa14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 TBX5Q99593 518 aa14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 TIMP4Q99727 224 aa14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 NDC1Q9BTX1 674 aa14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 RSRP1Q9BUV0 290 aa14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 FN3KQ9H479 309 aa14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 CALML5Q9NZT1 146 aa14.91□□□□□ -0.02
COL4A3BP-204ENST00000405807 A0A0G2JK05 382 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 A0A1W2PRU2 124 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 LRRN3E7EW58 273 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 OR1F1O43749 312 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 PLGP00747 810 aaPredicted RBP14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 CRYABP02511 175 aaKnown RBP14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 GPR1P46091 355 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 SELENOPP49908 381 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 ARHGAP19Q14CB8 494 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 NCMAPQ5T1S8 102 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 PSRC1Q6PGN9 363 aaPredicted RBP14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 MOAP1Q96BY2 351 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 SLC46A2Q9BY10 475 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 UBQLN3Q9H347 655 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 LRRN3Q9H3W5 708 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 KRCC1Q9NPI7 259 aaPredicted RBP14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 INPP5EQ9NRR6 644 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 GPR34Q9UPC5 381 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 CHST2Q9Y4C5 530 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 NPTNQ9Y639 398 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 KCNE3Q9Y6H6 103 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 A0A0A6YYD5 115 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 A0A0G2JN53 185 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 PLSCR5A0PG75 271 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 SOX15O60248 233 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 ERAL1O75616 437 aaKnown RBP14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 CD46P15529 392 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 NFYAP23511 347 aaPredicted RBP14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 SSR2P43308 183 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 DGCR2P98153 550 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 ZNF239Q16600 458 aaKnown RBP14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 TMEM215Q68D42 235 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 NIPAL3Q6P499 406 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 TMEM99Q8N816 258 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 RELL2Q8NC24 303 aaPredicted RBP14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 SORCS1Q8WY21 1168 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 C16orf58Q96GQ5 468 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 ZNF385AQ96PM9 386 aaKnown RBP14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 IFT27Q9BW83 186 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 PCBD2Q9H0N5 130 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 OR52A5Q9H2C5 316 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 SLC38A1Q9H2H9 487 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 CHRDQ9H2X0 955 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 MTG2Q9H4K7 406 aa14.9□□□□□ -0.02
COL4A3BP-204ENST00000405807 A0A0A6YYC8 382 aaPredicted RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 TMEM218A2RU14 115 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 I3L1I5 382 aaPredicted RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 MAN2B1O00754 1011 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 NPSP0C0P6 89 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 GABRA1P14867 456 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 TAS2R43P59537 309 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 DYRK1AQ13627 763 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 FAM189A2Q15884 450 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 SLC25A35Q3KQZ1 300 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 RNASE12Q5GAN4 147 aaKnown RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 PAPD4Q6PIY7 484 aaKnown RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 GDF7Q7Z4P5 450 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 NAXDQ8IW45 347 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 BMPERQ8N8U9 685 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 OR10H4Q8NGA5 316 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 TFGQ92734 400 aaPredicted RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZG16BQ96DA0 208 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 SLC41A3Q96GZ6 507 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 K7ESM1 405 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 MBTPS2O43462 519 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 FADS1O60427 444 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 PAPLNO95428 1278 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 SERPIND1P05546 499 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 SNRPCP09234 159 aaKnown RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 TYRP14679 529 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZNF14P17017 642 aaPredicted RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 C5AR1P21730 350 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 RGS8P57771 180 aaPredicted RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 BIKQ13323 160 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZSWIM7Q19AV6 140 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 TIPARPQ7Z3E1 657 aaKnown RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 PXKQ7Z7A4 578 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 ARMC10Q8N2F6 343 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 RAB3CQ96E17 227 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 MCHR1Q99705 422 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 CHIAQ9BZP6 476 aa14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 MTCL1Q9Y4B5 1905 aaKnown RBP14.89□□□□□ -0.03
COL4A3BP-204ENST00000405807 GLOD5A6NK44 160 aa14.88□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZNF593O00488 134 aaPredicted RBP14.88□□□□□ -0.03
COL4A3BP-204ENST00000405807 F12P00748 615 aaPredicted RBP14.88□□□□□ -0.03
COL4A3BP-204ENST00000405807 MT-ND4P03905 459 aa14.88□□□□□ -0.03
COL4A3BP-204ENST00000405807 PTGER1P34995 402 aa14.88□□□□□ -0.03
COL4A3BP-204ENST00000405807 NPBWR1P48145 328 aa14.88□□□□□ -0.03
COL4A3BP-204ENST00000405807 ZP1P60852 638 aa14.88□□□□□ -0.03
COL4A3BP-204ENST00000405807 E2F1Q01094 437 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms