RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 YES1P07947 543 aa26.11■■□□□ 1.77
USP42-202ENST00000404008 CHRNB4P30926 498 aa26.11■■□□□ 1.77
USP42-202ENST00000404008 KIR2DL2P43627 348 aaPredicted RBP26.11■■□□□ 1.77
USP42-202ENST00000404008 GPR4P46093 362 aa26.11■■□□□ 1.77
USP42-202ENST00000404008 OMPP47874 163 aa26.11■■□□□ 1.77
USP42-202ENST00000404008 GK3PQ14409 553 aa26.11■■□□□ 1.77
USP42-202ENST00000404008 GPAT4Q86UL3 456 aa26.11■■□□□ 1.77
USP42-202ENST00000404008 FAM26EQ8N5C1 309 aa26.11■■□□□ 1.77
USP42-202ENST00000404008 CNEP1R1Q8N9A8 125 aa26.11■■□□□ 1.77
USP42-202ENST00000404008 ITLN2Q8WWU7 325 aaPredicted RBP26.11■■□□□ 1.77
USP42-202ENST00000404008 SDCCAG3Q96C92 435 aa26.11■■□□□ 1.77
USP42-202ENST00000404008 FAM46AQ96IP4 442 aaKnown RBP26.11■■□□□ 1.77
USP42-202ENST00000404008 TACO1Q9BSH4 297 aaKnown RBP26.11■■□□□ 1.77
USP42-202ENST00000404008 KRCC1Q9NPI7 259 aaPredicted RBP26.11■■□□□ 1.77
USP42-202ENST00000404008 ZNF724A8MTY0 619 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 MS4A18H0YCH9 400 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 CLOCKO15516 846 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 ENTPD5O75356 428 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 IL18BPO95998 194 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 HIST1H2ABP04908 130 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 OPRM1P35372 400 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 SIRPAP78324 504 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 POU4F3Q15319 338 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 MS4A18Q3C1V0 323 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 HIST3H2AQ7L7L0 130 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 MRGPRGQ86SM5 289 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 LIX1LQ8IVB5 337 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 C10orf67Q8IYJ2 551 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 KDM8Q8N371 416 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 OR9K2Q8NGE7 335 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 ASB5Q8WWX0 329 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 HIST1H2ACQ93077 130 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 EMC3Q9P0I2 261 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 B3GAT1Q9P2W7 334 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 EMC9Q9Y3B6 208 aa26.1■■□□□ 1.77
USP42-202ENST00000404008 EFCAB9A8MZ26 197 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 OR10H3O60404 316 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 DEAF1O75398 565 aaPredicted RBP26.09■■□□□ 1.77
USP42-202ENST00000404008 SAGP10523 405 aaPredicted RBP26.09■■□□□ 1.77
USP42-202ENST00000404008 AGAP20933 346 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 IST1P53990 364 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 TMEM201Q5SNT2 666 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 EEF1A1P5Q5VTE0 462 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 ZFP1Q6P2D0 407 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 VWA1Q6PCB0 445 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 NANOGNBQ7Z5D8 188 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 LINC00471Q8N535 108 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 TAS2R5Q9NYW4 299 aa26.09■■□□□ 1.77
USP42-202ENST00000404008 LOC102725191A0A1B0GVB3 256 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 CDC42EP2O14613 210 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 CCNB2O95067 398 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 HPRP00739 348 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 TSPAN19P0C672 248 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 FCGR1AP12314 374 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 BMP5P22003 454 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 PUDPQ08623 228 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 ATP6AP1Q15904 470 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 MICAQ29983 383 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 ZER1Q7Z7L7 766 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 ZNF808Q8N4W9 903 aaPredicted RBP26.08■■□□□ 1.77
USP42-202ENST00000404008 ZNF775Q96BV0 537 aaPredicted RBP26.08■■□□□ 1.77
USP42-202ENST00000404008 STARD4Q96DR4 205 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 OXGR1Q96P68 337 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 NTN4Q9HB63 628 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 FANCFQ9NPI8 374 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 FLVCR1Q9Y5Y0 555 aa26.08■■□□□ 1.77
USP42-202ENST00000404008 H3BNX3 289 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 GPR171O14626 319 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 DVL2O14641 736 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 KLF4O43474 513 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 RNF224P0DH78 156 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 ADORA3P0DMS8 318 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 FASP25445 335 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 DNAJA1P31689 397 aaKnown RBP26.07■■□□□ 1.76
USP42-202ENST00000404008 IFNGR2P38484 337 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 SLC9A3P48764 834 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 ZP4Q12836 540 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 LAPTM4AQ15012 233 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 ZNF770Q6IQ21 691 aaPredicted RBP26.07■■□□□ 1.76
USP42-202ENST00000404008 XKRXQ6PP77 449 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 TMEM179BQ7Z7N9 219 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 OR6K3Q8NGY3 331 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 BLOC1S5-TXNDC5H3BN57 136 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 OR6A2O95222 327 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 UQCRC1P31930 480 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 RPS4XP62701 263 aaKnown RBP26.07■■□□□ 1.76
USP42-202ENST00000404008 IL1RL1Q01638 556 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 CDSNQ15517 529 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 C1orf94Q6P1W5 598 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 PGBD2Q6P3X8 592 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 CREB3L2Q70SY1 520 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 BTLAQ7Z6A9 289 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 OAFQ86UD1 273 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 ZIC4Q8N9L1 334 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 RELL2Q8NC24 303 aaPredicted RBP26.07■■□□□ 1.76
USP42-202ENST00000404008 OR9Q2Q8NGE9 314 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 OR13C2Q8NGS9 318 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 LILRB4Q8NHJ6 448 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 LRTOMTQ8WZ04 291 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 GPA33Q99795 319 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms