RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ZNF544Q6NX49 715 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 C5orf46Q6UWT4 87 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 ALPK2Q86TB3 2170 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 FBXL14Q8N1E6 418 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 DEPDC4Q8N2C3 294 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 HIPK4Q8NE63 616 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 ZNF417Q8TAU3 575 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 DNAJA4Q8WW22 397 aaPredicted RBP13.43□□□□□ -0.26
TPM1-207ENST00000403994 SLC38A4Q969I6 547 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 TAAR8Q969N4 342 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 MAGEB18Q96M61 343 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 ZNF607Q96SK3 696 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 ZNF587Q96SQ5 575 aaPredicted RBP13.43□□□□□ -0.26
TPM1-207ENST00000403994 REG4Q9BYZ8 158 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 RABEP2Q9H5N1 569 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 FKRPQ9H9S5 495 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 OBP2BQ9NPH6 170 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 KLHL14Q9P2G3 628 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 RCE1Q9Y256 329 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 ANGPT4Q9Y264 503 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 COL6A5A8TX70 2615 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 CHD3Q12873 2000 aaKnown RBP13.42□□□□□ -0.26
TPM1-207ENST00000403994 A0A0B4J2E0 115 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 A0A1B0GX12 115 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 PRORSD1PA6NEY8 169 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 EVPLLA8MZ36 301 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 AIM2O14862 343 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 UPK3AO75631 287 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 ZNF432O94892 652 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 GRPRP30550 384 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 FABP6P51161 128 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 NUDT6P53370 316 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 CLDN17P56750 224 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 PPP2R2BQ00005 443 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 DMTNQ08495 405 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 FAM91A1Q658Y4 838 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 HDXQ7Z353 690 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 RETREG3Q86VR2 466 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 PTOV1Q86YD1 416 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 ARMC8Q8IUR7 673 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 KDM8Q8N371 416 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 DPP10Q8N608 796 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 ADAD1Q96M93 576 aaKnown RBP13.42□□□□□ -0.26
TPM1-207ENST00000403994 WFDC6Q9BQY6 131 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 PRR14Q9BWN1 585 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 LINC00470Q9BZP3 86 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 NELFAQ9H3P2 528 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 VIPAS39Q9H9C1 493 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 NPHS2Q9NP85 383 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 LEF1Q9UJU2 399 aaPredicted RBP13.42□□□□□ -0.26
TPM1-207ENST00000403994 ATP23Q9Y6H3 246 aa13.42□□□□□ -0.26
TPM1-207ENST00000403994 CUBNO60494 3623 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 TRAV36DV7A0A075B6V5 113 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 IGHV1-18A0A0C4DH31 117 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 H7C417 338 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 TRAF3IP2O43734 574 aaPredicted RBP13.41□□□□□ -0.26
TPM1-207ENST00000403994 OR2T1O43869 369 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 SSX4O60224 188 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 H2AFXP16104 143 aaPredicted RBP13.41□□□□□ -0.26
TPM1-207ENST00000403994 ZNF43P17038 809 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 SH3BGRP55822 239 aaPredicted RBP13.41□□□□□ -0.26
TPM1-207ENST00000403994 PCBP3P57721 371 aaKnown RBP13.41□□□□□ -0.26
TPM1-207ENST00000403994 MTPNP58546 118 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 ROR2Q01974 943 aaKnown RBP13.41□□□□□ -0.26
TPM1-207ENST00000403994 SELPLGQ14242 412 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 CYP51A1Q16850 503 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 RUNDC3AQ59EK9 446 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 ULK3Q6PHR2 472 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 PRIMA1Q86XR5 153 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 ADPRHL1Q8NDY3 354 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 BHLHE22Q8NFJ8 381 aaPredicted RBP13.41□□□□□ -0.26
TPM1-207ENST00000403994 HTRA1Q92743 480 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 BCL2L2Q92843 193 aaPredicted RBP13.41□□□□□ -0.26
TPM1-207ENST00000403994 OXGR1Q96P68 337 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 SLC38A2Q96QD8 506 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 CGREF1Q99674 301 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 MOKQ9UQ07 419 aa13.41□□□□□ -0.26
TPM1-207ENST00000403994 IGHV4-30-2A0A087WSY4 118 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 ARPC4-TTLL3A0A0A6YYG9 625 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 ANGPT2O15123 496 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 TPST2O60704 377 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 EDF1O60869 148 aaKnown RBP13.4□□□□□ -0.26
TPM1-207ENST00000403994 SERPINB7O75635 380 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 TUBA1BP68363 451 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 TUBA4AP68366 448 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 OR1Q1Q15612 314 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
TPM1-207ENST00000403994 HMBOX1Q6NT76 420 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 ANKRD16Q6P6B7 361 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 TUBA1AQ71U36 451 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 H1FNTQ75WM6 255 aaPredicted RBP13.4□□□□□ -0.26
TPM1-207ENST00000403994 RANBP3LQ86VV4 465 aaPredicted RBP13.4□□□□□ -0.26
TPM1-207ENST00000403994 TMEM123Q8N131 208 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 SMYD1Q8NB12 490 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 C11orf65Q8NCR3 313 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 MAGEE2Q8TD90 523 aaPredicted RBP13.4□□□□□ -0.26
TPM1-207ENST00000403994 SLC47A1Q96FL8 570 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
TPM1-207ENST00000403994 ZNF317Q96PQ6 595 aaPredicted RBP13.4□□□□□ -0.26
TPM1-207ENST00000403994 OR2M2Q96R28 347 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms