RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ZNF511Q8NB15 262 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 OR7G1Q8NGA0 311 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 UBQLN3Q9H347 655 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 WIF1Q9Y5W5 379 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 CD1CP29017 333 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 ETV5P41161 510 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 Q6ZNB5 142 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 ESPNLQ6ZVH7 1005 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 OR5L1Q8NGL2 311 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 OR1S1Q8NH92 325 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 ABHD4Q8TB40 342 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 FNDC9Q8TBE3 224 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 ZNF845Q96IR2 970 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-204ENST00000400337 WDR76Q9H967 626 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 NXT1Q9UKK6 140 aaKnown RBP16.81■□□□□ 0.28
COL18A1-204ENST00000400337 B4DXG7 233 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 SLC19A1P41440 591 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 EFNA3P52797 238 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 GLB1L2Q8IW92 636 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 ZBTB8AQ96BR9 441 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 NICN1Q9BSH3 213 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 ANKRD19PQ9H560 264 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 RFPL3O75679 317 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 AGAP6Q5VW22 663 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 STEAP2Q8NFT2 490 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 GCDHQ92947 438 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-204ENST00000400337 AGAP4Q96P64 663 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 UTP23Q9BRU9 249 aaKnown RBP16.81■□□□□ 0.28
COL18A1-204ENST00000400337 PAPOLGQ9BWT3 736 aaKnown RBP16.81■□□□□ 0.28
COL18A1-204ENST00000400337 NRIP3Q9NQ35 241 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 C2orf72A6NCS6 295 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 AP1G1O43747 822 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 TMPRSS11DO60235 418 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 HBMQ6B0K9 141 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 SULF2Q8IWU5 870 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 OR6F1Q8NGZ6 308 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 RSPRY1Q96DX4 576 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 C1QTNF3Q9BXJ4 246 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 B3GNT2Q9NY97 397 aa16.81■□□□□ 0.28
COL18A1-204ENST00000400337 IGHV3-20A0A0C4DH32 117 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 A0A1B0GX78 115 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 SLC35A1P78382 337 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 AKR1C8PQ5T2L2 129 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 HACD4Q5VWC8 232 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 SAXO2Q658L1 398 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 LINC00346Q8IVM7 164 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 NKAIN4Q8IVV8 208 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 CPT1CQ8TCG5 803 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 ACKR4Q9NPB9 350 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 NOX4Q9NPH5 578 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 ASF1BQ9NVP2 202 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 CLEC2DQ9UHP7 191 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 PCDHGA1Q9Y5H4 931 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 CD14P08571 375 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 GRAMD2AQ8IUY3 354 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 BPIFB2Q8N4F0 458 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 C12orf45Q8N5I9 185 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-204ENST00000400337 PFN4Q8NHR9 129 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 KCTD12Q96CX2 325 aaKnown RBP16.8■□□□□ 0.28
COL18A1-204ENST00000400337 ARID1BQ8NFD5 2236 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-204ENST00000400337 CX3CR1P49238 355 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 HSD17B7P56937 341 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 ZNF385BQ569K4 471 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 NRARPQ7Z6K4 114 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 SLC25A37Q9NYZ2 338 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 PLSCR5A0PG75 271 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 TARM1B6A8C7 271 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 ZNF195O14628 629 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 GK2Q14410 553 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-204ENST00000400337 KCNAB1Q14722 419 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 CYHR1Q6ZMK1 362 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 ZFPM2Q8WW38 1151 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 RASD2Q96D21 266 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 ARL5BQ96KC2 179 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 STACQ99469 402 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 CHST8Q9H2A9 424 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 OBP2BQ9NPH6 170 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 MICAL3Q7RTP6 2002 aa16.8■□□□□ 0.28
COL18A1-204ENST00000400337 HMGN4O00479 90 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 IGHEP01854 428 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 Q499Y3 187 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 LGALS14Q8TCE9 139 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 ATP13A2Q9NQ11 1180 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 SFXN4Q6P4A7 337 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 LINC00696Q6ZRV3 163 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 CCL4L1Q8NHW4 92 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 OR14A2Q96R54 314 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 SULT4A1Q9BR01 284 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 TRAPPC2LH3BP13 241 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 KLK8O60259 260 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 FRMD1Q8N878 549 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 EHFQ9NZC4 300 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 CORINQ9Y5Q5 1042 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 SCN9AQ15858 1988 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 LCMT2O60294 686 aaKnown RBP16.79■□□□□ 0.28
COL18A1-204ENST00000400337 ALOX12BO75342 701 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 TSPAN15O95858 294 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 LGI1O95970 557 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 VEGFCP49767 419 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 DLX5P56178 289 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms