RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 NPRL2Q8WTW4 380 aa9.27□□□□□ -0.93
PTPRM-203ENST00000400060 COL26A1Q96A83 441 aa9.27□□□□□ -0.93
PTPRM-203ENST00000400060 MIB2Q96AX9 1013 aa9.27□□□□□ -0.93
PTPRM-203ENST00000400060 MAP3K3Q99759 626 aa9.27□□□□□ -0.93
PTPRM-203ENST00000400060 CWH43Q9H720 699 aa9.27□□□□□ -0.93
PTPRM-203ENST00000400060 SLC17A5Q9NRA2 495 aa9.27□□□□□ -0.93
PTPRM-203ENST00000400060 OPN4Q9UHM6 478 aa9.27□□□□□ -0.93
PTPRM-203ENST00000400060 TMEM184BQ9Y519 407 aaPredicted RBP9.27□□□□□ -0.93
PTPRM-203ENST00000400060 KCNMB2Q9Y691 235 aa9.27□□□□□ -0.93
PTPRM-203ENST00000400060 RPL34P49207 117 aaKnown RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 TAF10Q12962 218 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 EBPQ15125 230 aaKnown RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 SDHAF4Q5VUM1 108 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 PTOV1Q86YD1 416 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 HORMAD2Q8N7B1 307 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 OR6N1Q8NGY5 312 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 PADI3Q9ULW8 664 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 FLVCR2Q9UPI3 526 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 SLC35A3Q9Y2D2 325 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 HSPB2A8KAH6 182 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 B4DEV8 164 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 UBE2CO00762 179 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 MPC2O95563 127 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 ASGR1P07306 291 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 HOXC13P31276 330 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 OPRD1P41143 372 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 CASRP41180 1078 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 TAS2R46P59540 309 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 CDK5Q00535 292 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 HSPB2Q16082 182 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 MBOAT2Q6ZWT7 520 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 PUSL1Q8N0Z8 303 aaKnown RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 TMEM229BQ8NBD8 167 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 CDCP1Q9H5V8 836 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 MTHFD2LQ9H903 347 aaPredicted RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 CAPN10Q9HC96 672 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 DNAJB11Q9UBS4 358 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 EXOGQ9Y2C4 368 aaKnown RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 TMEM210A6NLX4 147 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 IQCF5A8MTL0 148 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 GCGP01275 180 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 IDSP22304 550 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 AK4P27144 223 aaPredicted RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 EPHA2P29317 976 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 CDX1P47902 265 aaPredicted RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 CAV2P51636 162 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 RING1Q06587 406 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 C18orf21Q32NC0 220 aaPredicted RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 LINC00303Q3SY05 128 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 SLC35D3Q5M8T2 416 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 CTSL3PQ5NE16 218 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 ATPAF1Q5TC12 328 aaPredicted RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 ETFRF1Q6IPR1 90 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 TMEM207Q6UWW9 146 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 RBMS3Q6XE24 437 aaKnown RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 TMPRSS11FQ6ZWK6 438 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 SLC24A5Q71RS6 500 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 OR13D1Q8NGV5 346 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 BRI3BPQ8WY22 251 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 CASD1Q96PB1 797 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 HHIPQ96QV1 700 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 SCN7AQ01118 1682 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 NHSQ6T4R5 1651 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 ANKRD20A5PA0PJZ0 165 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 TMEM212A6NML5 194 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 H0YIV9 168 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 RAB27BO00194 218 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 FOXE1O00358 373 aaPredicted RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 GSK3AP49840 483 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 LDLRAD3Q86YD5 345 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 CMTM4Q8IZR5 234 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 LKAAEAR1Q8TD35 194 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 INTS14Q96SY0 518 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 MVB12BQ9H7P6 319 aa9.26□□□□□ -0.93
PTPRM-203ENST00000400060 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.26□□□□□ -0.93
PTPRM-203ENST00000400060 IGKV6D-21A0A0A0MT36 114 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 LOC100289279A0A1B0GTE1 492 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 NPIPA7E9PJI5 369 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 CYB5BO43169 146 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 LY86O95711 162 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 WNT1P04628 370 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 NPIPA8P0DM63 369 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 P2RX1P51575 399 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 KLF9Q13886 244 aaPredicted RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 PDE7AQ13946 482 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 SFRP5Q5T4F7 317 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 DEFB128Q7Z7B8 93 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 TP53INP2Q8IXH6 220 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 OR51S1Q8NGJ8 323 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 SAMD10Q9BYL1 202 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 WWTR1Q9GZV5 400 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 OR52D1Q9H346 318 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 ELL3Q9HB65 397 aaPredicted RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 UBQLN4Q9NRR5 601 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 SLC22A7Q9Y694 548 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 SSC5DA1L4H1 1573 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 NDUFB2O95178 105 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 CD37P11049 281 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 CXCL2P19875 107 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 DHPSP49366 369 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms