RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 A0A1B0GX78 115 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 TCRBV16S1A1N1A0A5B0 115 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 FAM171A2A8MVW0 826 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 TOR1AO14656 332 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF264O43296 627 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 RNF13O43567 381 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 IFNGP01579 166 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 PSKH1P11801 424 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 FGF9P31371 208 aaPredicted RBP10.74□□□□□ -0.69
COL25A1-202ENST00000399127 GALNSP34059 522 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 OR2B6P58173 313 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 SLC3A1Q07837 685 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 GALEQ14376 348 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF79Q15937 498 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 HLA-BQ31612 363 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 FAM27D1Q5T7N8 215 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 FNDC7Q5VTL7 733 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF563Q8TA94 476 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 MVB12AQ96EY5 273 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 DIRAS2Q96HU8 199 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 EVA1AQ9H8M9 152 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 ZC4H2Q9NQZ6 224 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 DCAF16Q9NXF7 216 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 SUSD2Q9UGT4 822 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 ZMIZ1Q9ULJ6 1067 aa10.74□□□□□ -0.69
COL25A1-202ENST00000399127 PATE3B3GLJ2 98 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 HCRTR2O43614 444 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 CPNE3O75131 537 aaKnown RBP10.73□□□□□ -0.69
COL25A1-202ENST00000399127 WISP1O95388 367 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 IL12BP29460 328 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ACVR1BP36896 505 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 AQP2P41181 271 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF85Q03923 595 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 EBPQ15125 230 aaKnown RBP10.73□□□□□ -0.69
COL25A1-202ENST00000399127 TOMM34Q15785 309 aaPredicted RBP10.73□□□□□ -0.69
COL25A1-202ENST00000399127 BAK1Q16611 211 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 HLA-DQA1Q5Y7H0 255 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 WBP2NLQ6ICG8 309 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 GUSBP11Q6P575 273 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 FAM131AQ6UXB0 335 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF574Q6ZN55 896 aaPredicted RBP10.73□□□□□ -0.69
COL25A1-202ENST00000399127 C16orf47Q6ZP98 133 aaPredicted RBP10.73□□□□□ -0.69
COL25A1-202ENST00000399127 GDPD3Q7L5L3 318 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 MARCH3Q86UD3 253 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 SLC38A9Q8NBW4 561 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 FAM71CQ8NEG0 241 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 C17orf47Q8NEP4 570 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 OR5W2Q8NH69 310 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 JAM3Q9BX67 310 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 PPIL3Q9H2H8 161 aaKnown RBP10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ASB6Q9NWX5 421 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 MALT1Q9UDY8 824 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF346Q9UL40 294 aaKnown RBP10.73□□□□□ -0.69
COL25A1-202ENST00000399127 FRG2CA6NGY1 282 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF780AO75290 641 aaPredicted RBP10.73□□□□□ -0.69
COL25A1-202ENST00000399127 NUDT14O95848 222 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 TFP02787 698 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 YES1P07947 543 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 BTF3P20290 206 aaKnown RBP10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF117Q03924 483 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ACSM1Q08AH1 577 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 TAB1Q15750 504 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ZSWIM7Q19AV6 140 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 TP53I3Q53FA7 332 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 DTWD2Q8NBA8 298 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 OR6K6Q8NGW6 343 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 OR5J2Q8NH18 312 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 TRIM36Q9NQ86 728 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 GLTPQ9NZD2 209 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 ICAM5Q9UMF0 924 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 BAIAP2Q9UQB8 552 aa10.73□□□□□ -0.69
COL25A1-202ENST00000399127 PCNX3Q9H6A9 2034 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 OR6C68A6NDL8 312 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 H0YC42 278 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 TIAF1O95411 115 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 MT-ND5P03915 603 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 PDGFAP04085 211 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 F13BP05160 661 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 ITPKBP27987 946 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 TACR3P29371 465 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 GRPRP30550 384 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 PYCR1P32322 319 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 EGR4Q05215 589 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 PLCXD2Q0VAA5 305 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 BIKQ13323 160 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 DDI2Q5TDH0 399 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 WDR74Q6RFH5 385 aaPredicted RBP10.72□□□□□ -0.69
COL25A1-202ENST00000399127 ATG4DQ86TL0 474 aaPredicted RBP10.72□□□□□ -0.69
COL25A1-202ENST00000399127 NOXA1Q86UR1 476 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 UBQLNLQ8IYU4 475 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 THAP3Q8WTV1 239 aaPredicted RBP10.72□□□□□ -0.69
COL25A1-202ENST00000399127 TSSK2Q96PF2 358 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 WWTR1Q9GZV5 400 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 GAREM1Q9H706 876 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 SLC22A11Q9NSA0 550 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 EIF3KQ9UBQ5 218 aaKnown RBP10.72□□□□□ -0.69
COL25A1-202ENST00000399127 COPS7AQ9UBW8 275 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF337Q9Y3M9 751 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 FREM2Q5SZK8 3169 aa10.72□□□□□ -0.69
COL25A1-202ENST00000399127 EPHA8P29322 1005 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms