RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 EXOSC7Q15024 291 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 PON3Q15166 354 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PDGFRLQ15198 375 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GXYLT1Q4G148 440 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ZNF660Q6AZW8 331 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 CDC73Q6P1J9 531 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 C3orf33Q6P1S2 294 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ZNF613Q6PF04 617 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SEZ6L2Q6UXD5 910 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 HIST3H2AQ7L7L0 130 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 FAM122BQ7Z309 247 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OAFQ86UD1 273 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 LNX2Q8N448 690 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 RAB42Q8N4Z0 105 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SIRT6Q8N6T7 355 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SAMD12Q8N8I0 201 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ZNF784Q8NCA9 323 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 FAM71CQ8NEG0 241 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR10H4Q8NGA5 316 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 RNASE11Q8TAA1 199 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 RXFP4Q8TDU9 374 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 FGF14Q92915 247 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SMARCD2Q92925 531 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 HIST1H2ACQ93077 130 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ORAI1Q96D31 301 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SLC35A4Q96G79 324 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PRRC1Q96M27 445 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 DMRTA2Q96SC8 542 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PIGMQ9H3S5 423 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 H2AFY2Q9P0M6 372 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 PLEKHA6Q9Y2H5 1048 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SLC27A6Q9Y2P4 619 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 COL4A3Q01955 1670 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 TRAV27A0A087WT01 109 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 FXYD6-FXYD2A0A087WZ82 144 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 A0A1B0GUH1 482 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 A0A1B0GV90 55 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ARRDC5A6NEK1 342 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 RHPN2P1A8MT19 583 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 C1orf196B1AJZ1 125 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 LRRN3E7EW58 273 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GABRPO00591 440 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PHYHO14832 338 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PRODHO43272 600 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GALR3O60755 368 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 SPDEFO95238 335 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 APBB3O95704 486 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 EGFP01133 1207 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 MT-ND4P03905 459 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 EIF4EP06730 217 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 CEACAM5P06731 702 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 HPGDP15428 266 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 RPS2P15880 293 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 NPR2P20594 1047 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ACTR1BP42025 376 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SLC1A3P43003 542 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 RIDAP52758 137 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR10A3P58181 314 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GMFBP60983 142 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ACTR1AP61163 376 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PPP2CBP62714 309 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PPP2CAP67775 309 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PRR5P85299 388 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 RUNX3Q13761 415 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 MAPK14Q16539 360 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 DEFB110Q30KQ9 67 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 CDNFQ49AH0 187 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 HBMQ6B0K9 141 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR7E24Q6IFN5 339 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 C1orf94Q6P1W5 598 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SLC36A4Q6YBV0 504 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 Q6ZTK2 550 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 YAF2Q8IY57 180 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 TMEM185AQ8NFB2 350 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR13C5Q8NGS8 318 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 C1orf216Q8TAB5 229 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 WFIKKN2Q8TEU8 576 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 KCTD12Q96CX2 325 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 POLDIP3Q9BY77 421 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 FXYD6Q9H0Q3 95 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 LRRN3Q9H3W5 708 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GPN1Q9HCN4 374 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 AKAP7Q9P0M2 348 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 PIPOXQ9P0Z9 390 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PTGFRNQ9P2B2 879 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GHRLQ9UBU3 117 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 TESQ9UGI8 421 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 CBLCQ9ULV8 474 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 WDR45Q9Y484 360 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 C5orf52A6NGY3 159 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 TERTO14746 1132 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 TXNL1O43396 289 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 SC5DO75845 299 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 GATBO75879 557 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 UBXN7O94888 489 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 CTSBP07858 339 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 CD3GP09693 182 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 UBBP0CG47 229 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 UBCP0CG48 685 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 ACP2P11117 423 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms