RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ACTL6AO96019 429 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 AQP2P41181 271 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 DAP3P51398 398 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 GFRA1P56159 465 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 RAC3P60763 192 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 SLC35A2P78381 396 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 LGALS3BPQ08380 585 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 SLC10A1Q14973 349 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 OR7A5Q15622 319 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 TMEM176BQ3YBM2 270 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 ZNF773Q6PK81 442 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 CCDC103Q8IW40 242 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 ARL5BQ96KC2 179 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 OR5B2Q96R09 309 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 MFRPQ9BY79 579 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 KLHL1Q9NR64 748 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 MRPS18AQ9NVS2 196 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 TAS2R5Q9NYW4 299 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 PSORS1C1Q9UIG5 152 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 RASD1Q9Y272 281 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 PCDHGB1Q9Y5G3 927 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 NOX1Q9Y5S8 564 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 SNX5Q9Y5X3 404 aa17.12■□□□□ 0.33
TSPAN4-204ENST00000397404 FREM2Q5SZK8 3169 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 AKAP13Q12802 2813 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 TMEM8BA6NDV4 472 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 A6NIZ1 184 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 SLC22A31A6NKX4 558 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 MCIDASD6RGH6 385 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 LRRN3E7EW58 273 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 PRR23D1E9PI22 279 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 M0R082 166 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 F10P00742 488 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 PRR23D2P0DMB1 279 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 IMPDH2P12268 514 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 ST13P50502 369 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 NR1H2P55055 460 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 CTXN1P60606 82 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 RAP1BP61224 184 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 RAP1AP62834 184 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 MVKQ03426 396 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 APOFQ13790 326 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 RPUSD3Q6P087 351 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 TMEM154Q6P9G4 183 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 PRSS48Q7RTY5 328 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 FAM122BQ7Z309 247 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 SVOPQ8N4V2 548 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 ZNF417Q8TAU3 575 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 IL4I1Q96RQ9 567 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 ZNF587Q96SQ5 575 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 MYCBPQ99417 103 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 KATNB1Q9BVA0 655 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 TXNIPQ9H3M7 391 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 ZDHHC11Q9H8X9 412 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 FKBP14Q9NWM8 211 aa17.11■□□□□ 0.33
TSPAN4-204ENST00000397404 A0A087WV48 116 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 XKRYO14609 159 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 PPP1R3DO95685 299 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 RFPL3SP0C7P2 107 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 NR2C1P13056 603 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 POU3F2P20265 443 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 DIO1P49895 249 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 PPIAP62937 165 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 RAB40BQ12829 278 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 POU4F2Q12837 409 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 POU4F3Q15319 338 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 SLC35D3Q5M8T2 416 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 AADACL4Q5VUY2 407 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 C1QL3Q5VWW1 255 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 RNLSQ5VYX0 342 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 LAIR2Q6ISS4 152 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 CXXC5Q7LFL8 322 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 JAZF1Q86VZ6 243 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 TMEM251Q8N6I4 163 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 C9orf43Q8TAL5 461 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 FNDC8Q8TC99 324 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 WARS2Q9UGM6 360 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 IER3IP1Q9Y5U9 82 aa17.1■□□□□ 0.33
TSPAN4-204ENST00000397404 PINLYPA6NC86 204 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 AQP7P3A6NL99 342 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 CENPBD1B2RD01 187 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 RGS10O43665 173 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 ACVR2AP27037 513 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 HTR1FP30939 366 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 FMO3P31513 532 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 SLC15A1P46059 708 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 RPL5P46777 297 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 AGFG1P52594 562 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 OR2B6P58173 313 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 RPS3AP61247 264 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 RPL27P61353 136 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 H3F3AP84243 136 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 ZNF169Q14929 603 aaPredicted RBP17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 YRDCQ86U90 279 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 ARIH2OSQ8N7S6 290 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 ATP6V1C2Q8NEY4 427 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 MOSPD2Q8NHP6 518 aa17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 CPNE4Q96A23 557 aaPredicted RBP17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 ZNF582Q96NG8 517 aaPredicted RBP17.09■□□□□ 0.33
TSPAN4-204ENST00000397404 NPAS1Q99742 590 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms