RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 C10orf53Q8N6V4 93 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 ZPLD1Q8TCW7 415 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SLC25A43Q8WUT9 341 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-204ENST00000396548 FAM173AQ9BQD7 235 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SCNM1Q9BWG6 230 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 JAM3Q9BX67 310 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 ZFP64Q9NPA5 681 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 ABI3Q9P2A4 366 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 BSNQ9UPA5 3926 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SMIM31A0A1B0GVY4 71 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 OR2M5A3KFT3 312 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 OR5H15A6NDH6 313 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 M0R082 166 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 SDHAP31040 664 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 IDUAP35475 653 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 CASRP41180 1078 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 TBCEQ15813 527 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 HYAL4Q2M3T9 481 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 EMC4Q5J8M3 183 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 ADPRHL1Q8NDY3 354 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF417Q8TAU3 575 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF519Q8TB69 540 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF587Q96SQ5 575 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 DIMT1Q9UNQ2 313 aaKnown RBP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 POLHQ9Y253 713 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 LSM2Q9Y333 95 aaKnown RBP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 F13BP05160 661 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 SP1P08047 785 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 CDKN2AP42771 156 aaKnown RBP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 GPR85P60893 370 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 OC90Q02509 493 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 DBPQ10586 325 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 RAB40BQ12829 278 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 SYT6Q5T7P8 510 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 MEPCEQ7L2J0 689 aaKnown RBP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 ZNRF4Q8WWF5 429 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 SLC25A36Q96CQ1 311 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 RASD2Q96D21 266 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 KLHL1Q9NR64 748 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 SERINC1Q9NRX5 453 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 ALKBH4Q9NXW9 302 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIM39-204ENST00000396548 CORINQ9Y5Q5 1042 aa11.43□□□□□ -0.58
TRIM39-204ENST00000396548 A0A1W2PNV4 684 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 FAM47E-STBD1D6RA91 191 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 INMTO95050 263 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 MTNR1AP48039 350 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 CTXN1P60606 82 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 TMED1Q13445 227 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 MFSD13AQ14CX5 517 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 NEDD8Q15843 81 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 MESTQ5EB52 335 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 GID4Q8IVV7 300 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 WDFY1Q8IWB7 410 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 FAM83FQ8NEG4 500 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 FDCSPQ8NFU4 85 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 OR52E2Q8NGJ4 325 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 SNIP1Q8TAD8 396 aaKnown RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 RNFT2Q96EX2 444 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 TMEM80Q96HE8 168 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 PLEKHA8Q96JA3 519 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 Q96M85 177 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 JSRP1Q96MG2 331 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF703Q9H7S9 590 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 HAO2Q9NYQ3 351 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF346Q9UL40 294 aaKnown RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 TRAPPC4Q9Y296 219 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 SNX5Q9Y5X3 404 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 SPIN1Q9Y657 262 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 KCNMB2Q9Y691 235 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 TNRC6AQ8NDV7 1962 aaKnown RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 OR6C68A6NDL8 312 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 NPIPB13A6NJU9 1138 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 A6NL46 340 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 RIIAD1A6NNX1 92 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 NPIPB4C9JG80 1138 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 H3BML4 177 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 HIST1H2ABP04908 130 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 HPNP05981 417 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 CLUP10909 449 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF3P17036 446 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 RPL4P36578 427 aaKnown RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 CDH11P55287 796 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 GFRA1P56159 465 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 OR7A5Q15622 319 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 HIST3H2AQ7L7L0 130 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 HIST1H2ACQ93077 130 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 RFKQ969G6 155 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 TAS2R16Q9NYV7 291 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 B3GAT1Q9P2W7 334 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 DKKL1Q9UK85 242 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 RPH3AQ9Y2J0 694 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 MSRB2Q9Y3D2 182 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 HDGFL3Q9Y3E1 203 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 TEX13CA0A0J9YWL9 993 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 PRR23D1E9PI22 279 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 H3BSA7 217 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 PMS2P2O95744 297 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 FADS2O95864 444 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms