RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MEMO1Q9Y316 297 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 OR1D4P47884 311 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 PMS2CLQ68D20 193 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 HEPHL1Q6MZM0 1159 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SLC23A3Q6PIS1 610 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 GALNT10Q86SR1 603 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 JAGN1Q8N5M9 183 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 OR5AK2Q8NH90 309 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 FCAMRQ8WWV6 532 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 B3GNT4Q9C0J1 378 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CHST8Q9H2A9 424 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SPACA1Q9HBV2 294 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF281Q9Y2X9 895 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 KLF13Q9Y2Y9 288 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TRBV4-1A0A0J9YWV2 114 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 LINC01565O15544 149 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SCO2O43819 266 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CCNKO75909 580 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 GLCEO94923 617 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CHRM2P08172 466 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 DAPP51397 102 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 GALK2Q01415 458 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SELPLGQ14242 412 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ZMYND11Q15326 602 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 LAIR1Q6GTX8 287 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 LRFN4Q6PJG9 635 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF761Q86XN6 746 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 LACC1Q8IV20 430 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SAMD12Q8N8I0 201 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 POGLUT1Q8NBL1 392 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CDX2Q99626 313 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TXNIPQ9H3M7 391 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TRAPPC4Q9Y296 219 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 C2CD3Q4AC94 2353 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 UNC80Q8N2C7 3258 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 A0A0B4J2E0 115 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1B0GX12 115 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CDRT1O95170 752 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 RPS26P11Q5JNZ5 115 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF517Q6ZMY9 492 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 GDF7Q7Z4P5 450 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CCL4L1Q8NHW4 92 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SNAPC3Q92966 411 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SLC35A4Q96G79 324 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 DPH1Q9BZG8 443 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM138Q9NPI0 162 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 COMMD3Q9UBI1 195 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 LHX6Q9UPM6 363 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SPEF1Q9Y4P9 236 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1W2PQL4 384 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TCRBV16S1A1N1A0A5B0 115 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 NOTOA8MTQ0 251 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 BMXP51813 675 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 LAPTM4AQ15012 233 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 NNATQ16517 81 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ZMAT1Q5H9K5 638 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 COX20Q5RI15 118 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 GLB1L2Q8IW92 636 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 OR4K13Q8NH42 304 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 RFT1Q96AA3 541 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SAMD8Q96LT4 415 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SIRT3Q9NTG7 399 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ALKBH4Q9NXW9 302 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CMAHPQ9Y471 501 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TO15178 435 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 GAAP10253 952 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 DPP4P27487 766 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ECI1P42126 302 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ARPC4P59998 168 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 GRB2P62993 217 aaKnown RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 PLGLB1Q02325 96 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 POU3F1Q03052 451 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 GALEQ14376 348 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SLC36A2Q495M3 483 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 Q6ZS52 159 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CCDC36Q8IYA8 594 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF321PQ8N8H1 164 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SLC37A3Q8NCC5 494 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 UBASH3BQ8TF42 649 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SLC25A46Q96AG3 418 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 BRD7Q9NPI1 651 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 MRPL39Q9NYK5 338 aaKnown RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 S100A1P23297 94 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 EDNRAP25101 427 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ITGA3P26006 1051 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ABCD3P28288 659 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ARFRP1Q13795 201 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 WDR5BQ86VZ2 330 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 GPR137CQ8N3F9 429 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 OR14L1PQ8NHC6 308 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TEAD3Q99594 435 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 KLHL31Q9H511 634 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 MED11Q9P086 117 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 H7C1Q1 480 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 PRICKLE3O43900 615 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 FCMRO60667 390 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CSNK1A1P48729 337 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 FOXK2Q01167 660 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 MEF2DQ14814 521 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms