RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 COPS3Q9UNS2 423 aa16.3■□□□□ 0.2
SREBF1-204ENST00000395756 POLHQ9Y253 713 aa16.3■□□□□ 0.2
SREBF1-204ENST00000395756 A0A1W2PQM1 296 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 CXCR1P25024 350 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 CENPAP49450 140 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 ZNF74Q16587 644 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 KDM8Q8N371 416 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 ABHD4Q8TB40 342 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 AP3S1Q92572 193 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 DACT3Q96B18 629 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-204ENST00000395756 ATF6BQ99941 703 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 ACOXLQ9NUZ1 547 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 ICAM5Q9UMF0 924 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 A0A087WV48 116 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 FRG2CA6NGY1 282 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 PPM1BO75688 479 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 SPI1P17947 270 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 PWWP2BQ6NUJ5 590 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 DPY19L2P2Q6ZN68 376 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 JAZF1Q86VZ6 243 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 MINDY2Q8NBR6 621 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 MVB12AQ96EY5 273 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 CNN2Q99439 309 aaKnown RBP16.29■□□□□ 0.2
SREBF1-204ENST00000395756 LPAR4Q99677 370 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 STMN3Q9NZ72 180 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 GPR179Q6PRD1 2367 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 DCTN6O00399 190 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 ODF4Q2M2E3 257 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 HLA-BQ31612 363 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 PHF19Q5T6S3 580 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 CCDC28AQ8IWP9 274 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 SLC35F2Q8IXU6 374 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 GIMAP1Q8WWP7 306 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 SP140LQ9H930 580 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 ING1Q9UK53 422 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-204ENST00000395756 MRTO4Q9UKD2 239 aaKnown RBP16.29■□□□□ 0.2
SREBF1-204ENST00000395756 BAIAP2Q9UQB8 552 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 NCOR1O75376 2440 aa16.29■□□□□ 0.2
SREBF1-204ENST00000395756 CTRB1P17538 263 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 GALK2Q01415 458 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 ACSM3Q53FZ2 586 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 FNDC7Q5VTL7 733 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 CTRB2Q6GPI1 263 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 OR1N1Q8NGS0 311 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 OR11A1Q9GZK7 315 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 MMP25Q9NPA2 562 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 NRIP3Q9NQ35 241 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 MED12Q93074 2177 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 TMEM265A0A087WTH1 108 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 A0A0B4J203 849 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 ZNF354AO60765 605 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-204ENST00000395756 HIST1H2ABP04908 130 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 KRT8P05787 483 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 RPL18Q07020 188 aaKnown RBP16.28■□□□□ 0.2
SREBF1-204ENST00000395756 HIST3H2AQ7L7L0 130 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 HIST1H2ACQ93077 130 aa16.28■□□□□ 0.2
SREBF1-204ENST00000395756 FAM172BPA6NC97 362 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 SCRG1O75711 98 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 SCO1O75880 301 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 PTTG1O95997 202 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 HEXBP07686 556 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 CSF3P09919 207 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 NAGAP17050 411 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 PELI1Q96FA3 418 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 CCDC32Q9BV29 185 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 KCNN2Q9H2S1 579 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 CPNE5Q9HCH3 593 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 GRHPRQ9UBQ7 328 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 ARHGEF9O43307 516 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 PNMTP11086 282 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 FBXW4P57775 412 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 GLYR1Q49A26 553 aaPredicted RBP16.27■□□□□ 0.2
SREBF1-204ENST00000395756 RNASE12Q5GAN4 147 aaKnown RBP16.27■□□□□ 0.2
SREBF1-204ENST00000395756 BICRALQ6AI39 1079 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 TMEM71Q6P5X7 295 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 GLCCI1Q86VQ1 547 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 GUCD1Q96NT3 240 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 NPAS1Q99742 590 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 AIFM2Q9BRQ8 373 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 GAREM1Q9H706 876 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 GALNT9Q9HCQ5 603 aa16.27■□□□□ 0.2
SREBF1-204ENST00000395756 TRBV2A0A0J9YWF9 115 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 ANKRD61A6NGH8 418 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 OPN1LWP04000 364 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 EDNRAP25101 427 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 FAM205BPQ63HN1 556 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 ZNF440Q8IYI8 595 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 DEFB123Q8N688 67 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 MED18Q9BUE0 208 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 ALG12Q9BV10 488 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 CHRNA10Q9GZZ6 450 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 RASD1Q9Y272 281 aa16.27■□□□□ 0.19
SREBF1-204ENST00000395756 A8MV72 311 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-204ENST00000395756 SLC25A12O75746 678 aa16.26■□□□□ 0.19
SREBF1-204ENST00000395756 EPHA8P29322 1005 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-204ENST00000395756 PRPS1P60891 318 aa16.26■□□□□ 0.19
SREBF1-204ENST00000395756 ACSM1Q08AH1 577 aa16.26■□□□□ 0.19
SREBF1-204ENST00000395756 SLC25A35Q3KQZ1 300 aa16.26■□□□□ 0.19
SREBF1-204ENST00000395756 NKAIN1Q4KMZ8 207 aa16.26■□□□□ 0.19
SREBF1-204ENST00000395756 WDR74Q6RFH5 385 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms