RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 AGPAT2O15120 278 aa9.63□□□□□ -0.87
COL4A6-203ENST00000394872 SURF4O15260 269 aa9.63□□□□□ -0.87
COL4A6-203ENST00000394872 PRAMEF4O60810 478 aa9.63□□□□□ -0.87
COL4A6-203ENST00000394872 KIAA1024LP59773 190 aa9.63□□□□□ -0.87
COL4A6-203ENST00000394872 SEMA3BQ13214 749 aa9.63□□□□□ -0.87
COL4A6-203ENST00000394872 ZNF77Q15935 545 aa9.63□□□□□ -0.87
COL4A6-203ENST00000394872 FRMPD2BQ6IN97 320 aa9.63□□□□□ -0.87
COL4A6-203ENST00000394872 OR51J1Q9H342 316 aa9.63□□□□□ -0.87
COL4A6-203ENST00000394872 MBNL1Q9NR56 388 aaKnown RBP9.63□□□□□ -0.87
COL4A6-203ENST00000394872 TMEM72A0PK05 275 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 CDHR4A6H8M9 788 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 SHISA7A6NL88 538 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 HSBP1L1C9JCN9 74 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 ZNF254O75437 659 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 HOXB5P09067 269 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 TPT1P13693 172 aaKnown RBP9.62□□□□□ -0.87
COL4A6-203ENST00000394872 PRKACAP17612 351 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 CATR1Q13166 79 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 MFAP5Q13361 173 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 DYRK1AQ13627 763 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 ZNF750Q32MQ0 723 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 KANSL1Q7Z3B3 1105 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 SGPP1Q9BX95 441 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 NOX3Q9HBY0 568 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 RPH3ALQ9UNE2 315 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 MYH4Q9Y623 1939 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 IGHV3-20A0A0C4DH32 117 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 TMEM212A6NML5 194 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 FAM166BA8MTA8 275 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 GABRPO00591 440 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 SSX4O60224 188 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 CTNSO60931 367 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 RAB6AP20340 208 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 LGALS4P56470 323 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 MLLT11Q13015 90 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-203ENST00000394872 OR7G2Q8NG99 324 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 SLAMF9Q96A28 289 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 NXPH2O95156 264 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 STEAP3Q658P3 488 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 ZNF813Q6ZN06 617 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 PRICKLE2Q7Z3G6 844 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 OR5M1Q8NGP8 315 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 UBTD2Q8WUN7 234 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 CPPED1Q9BRF8 314 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-203ENST00000394872 PBX4Q9BYU1 374 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 SLAMF8Q9P0V8 285 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 P2RX6O15547 441 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 SLC34A2O95436 690 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 KITLGP21583 273 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 FGFBP1Q14512 234 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 KCNAB1Q14722 419 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 GLB1L2Q8IW92 636 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 RDH10Q8IZV5 341 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 GOT1L1Q8NHS2 421 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-203ENST00000394872 GGHQ92820 318 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 NMNAT2Q9BZQ4 307 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 GLIPR2Q9H4G4 154 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 FBXO7Q9Y3I1 522 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 A0A1W2PQ09 198 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 TCRBV3S1A0A5B6 114 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 B4GAT1O43505 415 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 LINC00346Q8IVM7 164 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 FRMD1Q8N878 549 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 OR2T11Q8NH01 316 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 SLC37A2Q8TED4 501 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 DAZAP1Q96EP5 407 aaKnown RBP9.62□□□□□ -0.87
COL4A6-203ENST00000394872 SYT11Q9BT88 431 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 MFFQ9GZY8 342 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 R3HDMLQ9H3Y0 253 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 MICAL3Q7RTP6 2002 aa9.62□□□□□ -0.87
COL4A6-203ENST00000394872 LRRC30A6NM36 301 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 GMDSO60547 372 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 CSNK1G2P78368 415 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 LSAMPQ13449 338 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 SMAD4Q13485 552 aaKnown RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 PAN3Q58A45 887 aaKnown RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 DESI1Q6ICB0 168 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 FCRLAQ7L513 359 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 LRRC28Q86X40 367 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 SCCPDHQ8NBX0 429 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 WDR76Q9H967 626 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 C19orf12Q9NSK7 152 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 MYO10Q9HD67 2058 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 A0A1W2PPH5 198 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 SOCS6O14544 535 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 GIFP27352 417 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 EIF2DP41214 584 aaKnown RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 TBPL2Q6SJ96 375 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 PIWIL3Q7Z3Z3 882 aaKnown RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 WFDC5Q8TCV5 224 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 HAS2Q92819 552 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 BOD1Q96IK1 185 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 CXorf36Q9H7Y0 433 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 TSPAN11A1L157 253 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 HOXC11O43248 304 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-203ENST00000394872 RAB40ALP0C0E4 278 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 LIM2P55344 173 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 HEPHL1Q6MZM0 1159 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 BPIFB2Q8N4F0 458 aa9.61□□□□□ -0.87
COL4A6-203ENST00000394872 SIRT6Q8N6T7 355 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms