RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TMPRSS5Q9H3S3 457 aa17.32■□□□□ 0.36
HOXC6-202ENST00000394331 CCDC86Q9H6F5 360 aaKnown RBP17.32■□□□□ 0.36
HOXC6-202ENST00000394331 TMEM185BQ9H7F4 350 aa17.32■□□□□ 0.36
HOXC6-202ENST00000394331 FMO6PO60774 539 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 ACTL6AO96019 429 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 MUC1P15941 1255 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 CSNK1EP49674 416 aaKnown RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 PCBP4P57723 403 aaKnown RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 PPP2CBP62714 309 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 PPP2CAP67775 309 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 DEFA6Q01524 100 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 RELQ04864 619 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 CBFBQ13951 182 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 ABHD13Q7L211 337 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 NUDT13Q86X67 352 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 RAB7BQ96AH8 199 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 S100A16Q96FQ6 103 aaKnown RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 PINK1Q9BXM7 581 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 TEX101Q9BY14 249 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 ACOD1A6NK06 481 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 C1QTNF3-AMACRE9PGA6 284 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 SYT5O00445 386 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 OGG1O15527 345 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 HOXC4P09017 264 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 FRKP42685 505 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 REEP5Q00765 189 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 DECR1Q16698 335 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 UAP1L1Q3KQV9 507 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 LPCAT3Q6P1A2 487 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 C11orf88Q6PI97 169 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 NKAIN4Q8IVV8 208 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 PCYT1BQ9Y5K3 369 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 NOTCH4Q99466 2003 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 PRAMEF27A3QJZ7 478 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 LRIT2A6NDA9 550 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 OR2W5A6NFC9 320 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 B4GALT2O60909 372 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 SLC2A10O95528 541 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 FGBP02675 491 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 NDUFV2P19404 249 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 TAS2R41P59536 307 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 FABP9Q0Z7S8 132 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 ST3GAL3Q11203 375 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 ILF3Q12906 894 aaKnown RBP eCLIP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 HSPB3Q12988 150 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 ZNF234Q14588 700 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 RAB12Q6IQ22 244 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 TMEM71Q6P5X7 295 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 MEX3DQ86XN8 651 aaKnown RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 OR10H4Q8NGA5 316 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 DIO2Q92813 273 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 GCDHQ92947 438 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 RSPRY1Q96DX4 576 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 C4orf36Q96KX1 117 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 ACKR4Q9NPB9 350 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 MMP26Q9NRE1 261 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 SIRT3Q9NTG7 399 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-202ENST00000394331 UQCC1Q9NVA1 299 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 TAS2R8Q9NYW2 309 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 SLC23A2Q9UGH3 650 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 ADAM29Q9UKF5 820 aa17.31■□□□□ 0.36
HOXC6-202ENST00000394331 RNF222A6NCQ9 220 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 SLC22A31A6NKX4 558 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 MELTFP08582 738 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 VIPR2P41587 438 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 SYPL1Q16563 259 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 NKAPLQ5M9Q1 402 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 TMEM69Q5SWH9 247 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 METRNLQ641Q3 311 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 FAAP20Q6NZ36 180 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 PARGQ86W56 976 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 ZSCAN1Q8NBB4 408 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 STOML3Q8TAV4 291 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 ACOT11Q8WXI4 607 aaPredicted RBP17.3■□□□□ 0.36
HOXC6-202ENST00000394331 ZNF75AQ96N20 296 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 TRMT61BQ9BVS5 477 aaKnown RBP17.3■□□□□ 0.36
HOXC6-202ENST00000394331 KLK3P07288 261 aaPredicted RBP17.3■□□□□ 0.36
HOXC6-202ENST00000394331 CBR1P16152 277 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 ACVR1BP36896 505 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 ACTC1P68032 377 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 ACTA1P68133 377 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 ZNF311Q5JNZ3 666 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 LY6G6FQ5SQ64 297 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 FAM111BQ6SJ93 734 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 ACOT7LQ6ZUV0 252 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 EXOSC8Q96B26 276 aaKnown RBP17.3■□□□□ 0.36
HOXC6-202ENST00000394331 HAVCR1Q96D42 359 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 MRPL38Q96DV4 380 aaKnown RBP17.3■□□□□ 0.36
HOXC6-202ENST00000394331 PFDN5Q99471 154 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 ZNF471Q9BX82 626 aaPredicted RBP17.3■□□□□ 0.36
HOXC6-202ENST00000394331 HDAC8Q9BY41 377 aa17.3■□□□□ 0.36
HOXC6-202ENST00000394331 BLOC1S5-TXNDC5H3BN57 136 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 CLN5O75503 358 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 EEF1A1P68104 462 aaKnown RBP17.29■□□□□ 0.36
HOXC6-202ENST00000394331 EEF1A1P5Q5VTE0 462 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 PRPF38BQ5VTL8 546 aaKnown RBP17.29■□□□□ 0.36
HOXC6-202ENST00000394331 PLBD1Q6P4A8 553 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 SMIM19Q96E16 107 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 TBX5Q99593 518 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 VRK1Q99986 396 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms