RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 KRT33BQ14525 404 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 RPE65Q16518 533 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 SYPL1Q16563 259 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 PMS2CLQ68D20 193 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 ARL9Q6T311 187 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 LCTLQ6UWM7 567 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 ESPNLQ6ZVH7 1005 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 WDR5BQ86VZ2 330 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 MEX3DQ86XN8 651 aaKnown RBP10.22□□□□□ -0.77
CUX1-204ENST00000393824 ZNF565Q8N9K5 539 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 OR51G2Q8NGK0 314 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 OR5K2Q8NHB8 316 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 ART5Q96L15 291 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 HINT3Q9NQE9 182 aaKnown RBP10.22□□□□□ -0.77
CUX1-204ENST00000393824 CLEC4AQ9UMR7 237 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 RPH3AQ9Y2J0 694 aaPredicted RBP10.22□□□□□ -0.77
CUX1-204ENST00000393824 CCDC163A0A0D9SF12 145 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 GABARAPH6UMI1 98 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 SYT5O00445 386 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 SOCS6O14544 535 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 BCAT2O15382 392 aaPredicted RBP10.22□□□□□ -0.77
CUX1-204ENST00000393824 ATP1B1P05026 303 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 GNSP15586 552 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 TAS2R43P59537 309 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 TSTA3Q13630 321 aaPredicted RBP10.22□□□□□ -0.77
CUX1-204ENST00000393824 IL10RAQ13651 578 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 SGCAQ16586 387 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 PGGHGQ32M88 737 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 OLFML2AQ68BL7 652 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 MTFR2Q6P444 385 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 NHLRC1Q6VVB1 395 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 ZNF761Q86XN6 746 aaPredicted RBP10.22□□□□□ -0.77
CUX1-204ENST00000393824 GID4Q8IVV7 300 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 MMP21Q8N119 569 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 BPIFCQ8NFQ6 507 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 GPBAR1Q8TDU6 330 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 MNTQ99583 582 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 PINK1Q9BXM7 581 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 KLHL1Q9NR64 748 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 INPP5EQ9NRR6 644 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 RASL12Q9NYN1 266 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 CNIH4Q9P003 139 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 APOBEC3BQ9UH17 382 aaKnown RBP10.22□□□□□ -0.77
CUX1-204ENST00000393824 ADAM29Q9UKF5 820 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 EDARQ9UNE0 448 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 ERVK-19Q9WJR5 959 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 MUC6Q6W4X9 2439 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 A0A1B0GTQ1 180 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 REM1O75628 298 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 MT-ND5P03915 603 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 RLN2P04090 185 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 NR2F1P10589 423 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 RPA2P15927 270 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 PAICSP22234 425 aaKnown RBP10.21□□□□□ -0.77
CUX1-204ENST00000393824 FPR3P25089 353 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 RFC3P40938 356 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 NXPH1P58417 271 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 GMFBP60983 142 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 TRA2BP62995 288 aaKnown RBP10.21□□□□□ -0.77
CUX1-204ENST00000393824 LGALS3BPQ08380 585 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 ACSM3Q53FZ2 586 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 CCDC157Q569K6 752 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 KHDRBS2Q5VWX1 349 aaKnown RBP10.21□□□□□ -0.77
CUX1-204ENST00000393824 FAM180BQ6P0A1 224 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 C5orf46Q6UWT4 87 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 APOOLQ6UXV4 268 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 MOB3CQ70IA8 216 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 KRT77Q7Z794 578 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 FAM129CQ86XR2 697 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 CPOQ8IVL8 374 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 OR2I1PQ8NGU4 316 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 OR10K1Q8NGX5 313 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 PIGKQ92643 395 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 PGLYRP3Q96LB9 341 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 SMOC1Q9H4F8 434 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 ZNF768Q9H5H4 540 aaKnown RBP10.21□□□□□ -0.77
CUX1-204ENST00000393824 GSN-AS1Q9NRJ2 163 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 TAS2R3Q9NYW6 316 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 MRPL15Q9P015 296 aaKnown RBP10.21□□□□□ -0.77
CUX1-204ENST00000393824 PCDHGA5Q9Y5G8 931 aa10.21□□□□□ -0.77
CUX1-204ENST00000393824 A0A0G2JPF8 293 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 HNRNPCL3B7ZW38 293 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 E9PI62 339 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 PLPP1O14494 284 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 SIGLEC5O15389 551 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 HNRNPCL4P0DMR1 293 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 NME1P15531 152 aaKnown RBP10.21□□□□□ -0.78
CUX1-204ENST00000393824 BSGP35613 385 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 KHKP50053 298 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 TRAM2Q15035 370 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 UBE2NLQ5JXB2 153 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 LYSMD4Q5XG99 296 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 UQCC3Q6UW78 93 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 ADCK2Q7Z695 626 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 DMBX1Q8NFW5 382 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 OR52E1Q8NGJ3 308 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 SUN3Q8TAQ9 357 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 FAM46AQ96IP4 442 aaKnown RBP10.21□□□□□ -0.78
CUX1-204ENST00000393824 SLC35G5Q96KT7 338 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 SPOCK3Q9BQ16 436 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms