RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 EPHX4Q8IUS5 362 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 SCAIQ8N9R8 606 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 ADPRHL1Q8NDY3 354 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 ZNF417Q8TAU3 575 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 ADAMTS16Q8TE57 1224 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 MPP4Q96JB8 637 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 MUS81Q96NY9 551 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 OXGR1Q96P68 337 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 ZNF587Q96SQ5 575 aaPredicted RBP10.42□□□□□ -0.74
RFC4-202ENST00000392481 AMBRA1Q9C0C7 1298 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 ESRP2Q9H6T0 727 aaKnown RBP10.42□□□□□ -0.74
RFC4-202ENST00000392481 UBTD1Q9HAC8 227 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 SEC14L4Q9UDX3 406 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 SH3GLB1Q9Y371 365 aa10.42□□□□□ -0.74
RFC4-202ENST00000392481 SETD2Q9BYW2 2564 aaPredicted RBP10.42□□□□□ -0.74
RFC4-202ENST00000392481 NDUFAB1O14561 156 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 RAD51DO75771 328 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 LYPD3O95274 346 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 BGLAPP02818 100 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 THY1P04216 161 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 MPGP29372 298 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 PRDX6P30041 224 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 FOXG1P55316 489 aaPredicted RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 LIPEQ05469 1076 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 GABRA6Q16445 453 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 DEFB113Q30KQ7 82 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 CYBRD1Q53TN4 286 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 NCMAPQ5T1S8 102 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 C1QTNF12Q5T7M4 302 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 ZNF704Q6ZNC4 412 aaPredicted RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 C20orf204Q6ZNR8 217 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 ABHD12BQ7Z5M8 362 aaPredicted RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 TSPYL5Q86VY4 417 aaPredicted RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 KDM8Q8N371 416 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 C1orf162Q8NEQ5 155 aaPredicted RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 SLC41A3Q96GZ6 507 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 BEX4Q9NWD9 120 aaPredicted RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 B3GAT1Q9P2W7 334 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 RCE1Q9Y256 329 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 RAI1Q7Z5J4 1906 aaPredicted RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 USF3Q68DE3 2245 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 NME4O00746 187 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 KRT33AO76009 404 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 ZNF432O94892 652 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 PLAUP00749 431 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 MT-ATP6P00846 226 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 CD3EP07766 207 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 NQO1P15559 274 aaKnown RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 SELENOPP49908 381 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 NUDT2P50583 147 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 SLC7A2P52569 658 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 CLDN17P56750 224 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 LTBQ06643 244 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 C1DQ13901 141 aaKnown RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 LRRC23Q53EV4 343 aaPredicted RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 ADAM5Q6NVV9 412 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 NIPAL3Q6P499 406 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 WDR88Q6ZMY6 472 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 C17orf78Q8N4C9 275 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 PIP4P2Q8N4L2 257 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 C10orf53Q8N6V4 93 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 PIGTQ969N2 578 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 MOGAT1Q96PD6 335 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 PIP5K1AQ99755 562 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 ZNF426Q9BUY5 554 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 ASPNQ9BXN1 380 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 LINC00470Q9BZP3 86 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 SLC19A3Q9BZV2 496 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 POLR2J2Q9GZM3 115 aaKnown RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 POLR2J3Q9H1A7 115 aaKnown RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 MRPL39Q9NYK5 338 aaKnown RBP10.41□□□□□ -0.74
RFC4-202ENST00000392481 SLC7A7Q9UM01 511 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 RNF115Q9Y4L5 304 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 SLC25A15Q9Y619 301 aa10.41□□□□□ -0.74
RFC4-202ENST00000392481 HEATR1Q9H583 2144 aaKnown RBP10.4□□□□□ -0.74
RFC4-202ENST00000392481 DPRXA6NFQ7 191 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 ZNF587BE7ETH6 402 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 MS4A18H0YCH9 400 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 HS3ST1O14792 307 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 TRAF3IP2O43734 574 aaPredicted RBP10.4□□□□□ -0.75
RFC4-202ENST00000392481 OR5F1O95221 314 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 TNFRSF1BP20333 461 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 PTNP21246 168 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 CBLP22681 906 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 GSK3BP49841 420 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 SELENOWP63302 87 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 BSPH1Q075Z2 132 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 PMS2P3Q13401 168 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 MS4A18Q3C1V0 323 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 C9orf135Q5VTT2 229 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 TTC33Q6PID6 262 aaPredicted RBP10.4□□□□□ -0.75
RFC4-202ENST00000392481 PIGWQ7Z7B1 504 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 UEVLDQ8IX04 471 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 ZNF611Q8N823 705 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 ANKK1Q8NFD2 765 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 OR52N5Q8NH56 324 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 LZICQ8WZA0 190 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 BOD1Q96IK1 185 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 ALG2Q9H553 416 aa10.4□□□□□ -0.75
RFC4-202ENST00000392481 ARL2BPQ9Y2Y0 163 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms