RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 WDR74Q6RFH5 385 aaPredicted RBP17.42■□□□□ 0.38
CCDC50-202ENST00000392456 PGAP1Q75T13 922 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 DPPA2Q7Z7J5 298 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 HRASLS5Q96KN8 279 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 OR51I1Q9H343 314 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 NPTNQ9Y639 398 aa17.42■□□□□ 0.38
CCDC50-202ENST00000392456 MEX3AA1L020 520 aaKnown RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 TGFBR3LH3BV60 316 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 SIX6O95475 246 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 ARAFP10398 606 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 CPMP14384 443 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 CXCL2P19875 107 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 TNFRSF1BP20333 461 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 INPP1P49441 399 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 MXD1Q05195 221 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 GPR176Q14439 515 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 TRMT12Q53H54 448 aaKnown RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 FAM111BQ6SJ93 734 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 DGAT2L6Q6ZPD8 337 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 CBLL1Q75N03 491 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 LRRC25Q8N386 305 aaPredicted RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 OR2T35Q8NGX2 323 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 ANKRD9Q96BM1 317 aaPredicted RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 MMABQ96EY8 250 aaPredicted RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 POM121Q96HA1 1249 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 TPD52L3Q96J77 140 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 SLC41A2Q96JW4 573 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 CHRNA10Q9GZZ6 450 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 SEMA5BQ9P283 1151 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 DHCR7Q9UBM7 475 aaKnown RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 MRTO4Q9UKD2 239 aaKnown RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 PSMD9O00233 223 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 RAD1O60671 282 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 DIRAS1O95057 198 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 CDRT1O95170 752 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 RECKO95980 971 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 BCHEP06276 602 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 ARL4DP49703 201 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 TSPAN5P62079 268 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 HABP2Q14520 560 aaPredicted RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 B3GNTL1Q67FW5 361 aaPredicted RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 D2HGDHQ8N465 521 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 PRR18Q8N4B5 295 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 SNX33Q8WV41 574 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 XAGE5Q8WWM1 108 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 HSH2DQ96JZ2 352 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 MEGF10Q96KG7 1140 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 KATNB1Q9BVA0 655 aa17.41■□□□□ 0.38
CCDC50-202ENST00000392456 PDP1Q9P0J1 537 aaPredicted RBP17.41■□□□□ 0.38
CCDC50-202ENST00000392456 FITM1A5D6W6 292 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 TXNL1O43396 289 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 HYAL3O43820 417 aaPredicted RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 TOXO94900 526 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 HPP00738 406 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 IL1AP01583 271 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 FPR1P21462 350 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 DNAJA1P31689 397 aaKnown RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 RAB38P57729 211 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 VLDLRP98155 873 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 DHODHQ02127 395 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 SYPL1Q16563 259 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 ZNF57Q68EA5 555 aaPredicted RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 CNIH2Q6PI25 160 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 METAP1DQ6UB28 335 aaPredicted RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 TTLL10Q6ZVT0 673 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 PUSL1Q8N0Z8 303 aaKnown RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 BPIFCQ8NFQ6 507 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 RXFP4Q8TDU9 374 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 CDCA4Q9BXL8 241 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 GPR75O95800 540 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 ADRA2AP08913 450 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 MPLP40238 635 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 PCBP3P57721 371 aaKnown RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 BTG2P78543 158 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 DCDP81605 110 aaKnown RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 ZNF155Q12901 538 aaPredicted RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 FAM53BQ14153 422 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 KDF1Q8NAX2 398 aaPredicted RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 NUP43Q8NFH3 380 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 CNOT9Q92600 299 aaKnown RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 TMEM19Q96HH6 336 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 SLC35G5Q96KT7 338 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 SYNDIG1Q9H7V2 258 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 SEMA3GQ9NS98 782 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 TRPC4Q9UBN4 977 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 SAMD4AQ9UPU9 718 aaKnown RBP17.4■□□□□ 0.38
CCDC50-202ENST00000392456 CCDC88CQ9P219 2028 aa17.4■□□□□ 0.38
CCDC50-202ENST00000392456 NINQ8N4C6 2090 aa17.39■□□□□ 0.38
CCDC50-202ENST00000392456 PRAMEF25A6NGN4 478 aa17.39■□□□□ 0.37
CCDC50-202ENST00000392456 NSA2O95478 260 aaKnown RBP17.39■□□□□ 0.37
CCDC50-202ENST00000392456 CD96P40200 585 aa17.39■□□□□ 0.37
CCDC50-202ENST00000392456 OR1D4P47884 311 aa17.39■□□□□ 0.37
CCDC50-202ENST00000392456 RBBP4Q09028 425 aa17.39■□□□□ 0.37
CCDC50-202ENST00000392456 CCDC157Q569K6 752 aa17.39■□□□□ 0.37
CCDC50-202ENST00000392456 SFRP5Q5T4F7 317 aa17.39■□□□□ 0.37
CCDC50-202ENST00000392456 TMEM71Q6P5X7 295 aa17.39■□□□□ 0.37
CCDC50-202ENST00000392456 TMEM64Q6YI46 380 aa17.39■□□□□ 0.37
CCDC50-202ENST00000392456 HMGN2P46Q86SG4 172 aa17.39■□□□□ 0.37
CCDC50-202ENST00000392456 RHOVQ96L33 236 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms