RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 ACPTQ9BZG2 426 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 OPN3Q9H1Y3 402 aaPredicted RBP5.32□□□□□ -1.56
RFC1-202ENST00000381897 SLC38A1Q9H2H9 487 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 R3HDMLQ9H3Y0 253 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 TM7SF3Q9NS93 570 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 IMP3Q9NV31 184 aaKnown RBP5.32□□□□□ -1.56
RFC1-202ENST00000381897 HAO2Q9NYQ3 351 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 POMT2Q9UKY4 750 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 QSER1Q2KHR3 1735 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 A0A0A6YYC8 382 aaPredicted RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 FAM74A7A6NL05 159 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 SERPINE3A8MV23 424 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 I3L1I5 382 aaPredicted RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 OR1I1O60431 355 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ZNF254O75437 659 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 CPN1P15169 458 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 BCL3P20749 454 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 EDNRBP24530 442 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 GDF5P43026 501 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ACTC1P68032 377 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ACTA1P68133 377 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 HOXC5Q00444 222 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 SLC3A1Q07837 685 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 FAM74A3Q4VXF1 159 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 SLC39A12Q504Y0 691 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ZNF628Q5EBL2 1059 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 TCEAL5Q5H9L2 206 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 LAIR2Q6ISS4 152 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 LYPD4Q6UWN0 246 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 LBX2Q6XYB7 198 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ASPGQ86U10 573 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 LRRC56Q8IYG6 542 aaPredicted RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 SLC44A3Q8N4M1 653 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 OR13C5Q8NGS8 318 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 INPP5EQ9NRR6 644 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 SIRT3Q9NTG7 399 aaPredicted RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 HIF1ANQ9NWT6 349 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 TAS2R8Q9NYW2 309 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 SNX11Q9Y5W9 270 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 V9GYY9 64 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 A0A0G2JMP0 313 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ZNF98A6NK75 572 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ANKRD66B4E2M5 251 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 B9A039 149 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ARPC5O15511 151 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 GABRB1P18505 474 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 TIA1P31483 386 aaKnown RBP eCLIP5.31□□□□□ -1.56
RFC1-202ENST00000381897 CRYBB2P43320 205 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 EPHA5P54756 1037 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ZNF79Q15937 498 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 MAPK14Q16539 360 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 OTUD1Q5VV17 481 aaPredicted RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 HEPHL1Q6MZM0 1159 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ARL9Q6T311 187 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 SUSD1Q6UWL2 747 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 MEX3BQ6ZN04 569 aaKnown RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 MED25Q71SY5 747 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 OR2G2Q8NGZ5 317 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 THAP6Q8TBB0 222 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ADAMTS15Q8TE58 950 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 MITD1Q8WV92 249 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 CNTNAP3BQ96NU0 1288 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 NECTIN4Q96NY8 510 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 DIRC2Q96SL1 478 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ZIC5Q96T25 663 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 TMPRSS13Q9BYE2 586 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 GPR61Q9BZJ8 451 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 PIGMQ9H3S5 423 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ZNF275Q9NSD4 429 aaPredicted RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 MED9Q9NWA0 146 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 SLC5A6Q9Y289 635 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 LY75O60449 1722 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 MYO18AQ92614 2054 aaKnown RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 ADAM10O14672 748 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 HMGB3O15347 200 aaKnown RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 DUSP11O75319 330 aaKnown RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 FGF18O76093 207 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 SYNGR4O95473 234 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 C6orf47O95873 294 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 HLA-DQB1P01920 261 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 RLN2P04090 185 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 TIMP2P16035 220 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 FGF9P31371 208 aaPredicted RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 HMGCLP35914 325 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 ATP5C1P36542 298 aaKnown RBP5.31□□□□□ -1.56
RFC1-202ENST00000381897 BDKRB1P46663 353 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 BIKQ13323 160 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 TPBGQ13641 420 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 PTPRCAPQ14761 206 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 SSX1Q16384 188 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 PNLIPRP3Q17RR3 467 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 UQCC3Q6UW78 93 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 GPR142Q7Z601 462 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 TMED4Q7Z7H5 227 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 KMT5CQ86Y97 462 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 TEX26Q8N6G2 289 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 TMEM116Q8NCL8 245 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 OR52I1Q8NGK6 324 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 OR13C9Q8NGT0 318 aa5.31□□□□□ -1.56
RFC1-202ENST00000381897 OR5J2Q8NH18 312 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms