RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PRRT3Q5FWE3 981 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 UBE2NLQ5JXB2 153 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 FIGNL1Q6PIW4 674 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 ZC3H14Q6PJT7 736 aaKnown RBP12.73□□□□□ -0.37
SDC1-202ENST00000381150 OR5M9Q8NGP3 310 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 CNRIP1Q96F85 164 aaPredicted RBP12.73□□□□□ -0.37
SDC1-202ENST00000381150 C7orf50Q9BRJ6 194 aaKnown RBP12.73□□□□□ -0.37
SDC1-202ENST00000381150 PTDSS2Q9BVG9 487 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 AICDAQ9GZX7 198 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 ANKRD19PQ9H560 264 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 THY1P04216 161 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 ZNF3P17036 446 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 CERS1P27544 350 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 ZNF85Q03923 595 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 FAM209BQ5JX69 171 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 HACD4Q5VWC8 232 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 OR4C11Q6IEV9 310 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 PAQR8Q8TEZ7 354 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 TAS2R5Q9NYW4 299 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 IGKV1-8A0A0C4DH67 115 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 IMPA2O14732 288 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 KAT7O95251 611 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 S100A9P06702 114 aaKnown RBP12.72□□□□□ -0.37
SDC1-202ENST00000381150 P2RX1P51575 399 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 REEP5Q00765 189 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 RNF44Q7L0R7 432 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 TIMP4Q99727 224 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 RSPH9Q9H1X1 276 aaPredicted RBP12.72□□□□□ -0.37
SDC1-202ENST00000381150 KCNK15Q9H427 330 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 ESRP2Q9H6T0 727 aaKnown RBP12.72□□□□□ -0.37
SDC1-202ENST00000381150 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
SDC1-202ENST00000381150 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 ZNF346Q9UL40 294 aaKnown RBP12.72□□□□□ -0.37
SDC1-202ENST00000381150 LINC00587B1AMM8 73 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 GALR3O60755 368 aaPredicted RBP12.72□□□□□ -0.37
SDC1-202ENST00000381150 PAK4O96013 591 aaPredicted RBP12.72□□□□□ -0.37
SDC1-202ENST00000381150 BMP8BP34820 402 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 HSD17B2P37059 387 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 BMP8AQ7Z5Y6 402 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 OR2AK2Q8NG84 335 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 TMEM239Q8WW34 195 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 BPIFA2Q96DR5 249 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 TNFRSF13CQ96RJ3 184 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 SFXN1Q9H9B4 322 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 FBXO4Q9UKT5 387 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 OR1A2Q9Y585 309 aa12.72□□□□□ -0.37
SDC1-202ENST00000381150 PRR19A6NJB7 356 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 OR2AT4A6NND4 320 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 GABARAPH6UMI1 98 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 AGPAT2O15120 278 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 FADS1O60427 444 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 CSNK2A2P19784 350 aaPredicted RBP12.71□□□□□ -0.37
SDC1-202ENST00000381150 AKR1C3P42330 323 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 RPS27P42677 84 aaKnown RBP12.71□□□□□ -0.37
SDC1-202ENST00000381150 TAS2R43P59537 309 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 SIRPAP78324 504 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 STPG1Q5TH74 334 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 ZNF626Q68DY1 528 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 ZNF793Q6ZN11 406 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.37
SDC1-202ENST00000381150 SPAG16Q8N0X2 631 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 KCT2Q8NC54 265 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 PELI1Q96FA3 418 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 AHCYL2Q96HN2 611 aaKnown RBP12.71□□□□□ -0.37
SDC1-202ENST00000381150 HSPA12BQ96MM6 686 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 IKZF2Q9UKS7 526 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 NOP16Q9Y3C1 178 aaKnown RBP12.71□□□□□ -0.37
SDC1-202ENST00000381150 ZNF780BQ9Y6R6 833 aa12.71□□□□□ -0.37
SDC1-202ENST00000381150 TRAV18A0A075B6X5 111 aa12.71□□□□□ -0.38
SDC1-202ENST00000381150 TRBV23-1A0A0A0MS06 115 aa12.71□□□□□ -0.38
SDC1-202ENST00000381150 S100A6P06703 90 aa12.71□□□□□ -0.38
SDC1-202ENST00000381150 AK4P27144 223 aaPredicted RBP12.71□□□□□ -0.38
SDC1-202ENST00000381150 RBM39Q14498 530 aaKnown RBP12.71□□□□□ -0.38
SDC1-202ENST00000381150 OR7A5Q15622 319 aa12.71□□□□□ -0.38
SDC1-202ENST00000381150 CST6Q15828 149 aa12.71□□□□□ -0.38
SDC1-202ENST00000381150 MAMSTRQ6ZN01 415 aa12.71□□□□□ -0.38
SDC1-202ENST00000381150 PUSL1Q8N0Z8 303 aaKnown RBP12.71□□□□□ -0.38
SDC1-202ENST00000381150 C12orf45Q8N5I9 185 aaPredicted RBP12.71□□□□□ -0.38
SDC1-202ENST00000381150 NSMAFQ92636 917 aa12.71□□□□□ -0.38
SDC1-202ENST00000381150 INSM2Q96T92 566 aaPredicted RBP12.71□□□□□ -0.38
SDC1-202ENST00000381150 EYSQ5T1H1 3165 aa12.71□□□□□ -0.38
SDC1-202ENST00000381150 OR14I1A6ND48 311 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 LRIT2A6NDA9 550 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 TUBAL3A6NHL2 446 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 ZNF879B4DU55 563 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 SELENOFO60613 162 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 ANXA2P07355 339 aaKnown RBP12.7□□□□□ -0.38
SDC1-202ENST00000381150 SPP1P10451 314 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 EN2P19622 333 aaPredicted RBP12.7□□□□□ -0.38
SDC1-202ENST00000381150 MEOX2P50222 304 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 RAB13P51153 203 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 RAG2P55895 527 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 ACSM1Q08AH1 577 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 PLA2G7Q13093 441 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 RBMS2Q15434 407 aaKnown RBP12.7□□□□□ -0.38
SDC1-202ENST00000381150 CCDC157Q569K6 752 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 PAN3Q58A45 887 aaKnown RBP12.7□□□□□ -0.38
SDC1-202ENST00000381150 MANEAQ5SRI9 462 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms