RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TDGF1P3P51864 188 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 PRKAG1P54619 331 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 CDH11P55287 796 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 MGAT2Q10469 447 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 FOXD4Q12950 439 aaPredicted RBP11.25□□□□□ -0.61
VRK3-202ENST00000377011 CDK10Q15131 360 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 LTB4RQ15722 352 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 BAK1Q16611 211 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 FLYWCH1Q4VC44 716 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 ZNF766Q5HY98 468 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 NXNL2Q5VZ03 156 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 C22orf42Q6IC83 251 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 FAM111BQ6SJ93 734 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 TMEM107Q6UX40 140 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 MBOAT2Q6ZWT7 520 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 SPATC1Q76KD6 591 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 C16orf62Q7Z3J2 963 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 GALNTL5Q7Z4T8 443 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 CCDC116Q8IYX3 515 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 VWA5B2Q8N398 1253 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 KLHL36Q8N4N3 616 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 ASCC1Q8N9N2 400 aaKnown RBP11.25□□□□□ -0.61
VRK3-202ENST00000377011 OR8D4Q8NGM9 314 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 ZC3HAV1LQ96H79 300 aaKnown RBP11.25□□□□□ -0.61
VRK3-202ENST00000377011 ST6GAL2Q96JF0 529 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 MS4A4EQ96PG1 132 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 KATNB1Q9BVA0 655 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 EGLN3Q9H6Z9 239 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 DDX28Q9NUL7 540 aaKnown RBP11.25□□□□□ -0.61
VRK3-202ENST00000377011 ADAM30Q9UKF2 790 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 ERVK-19Q9WJR5 959 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 DTX4Q9Y2E6 619 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 CDH10Q9Y6N8 788 aa11.25□□□□□ -0.61
VRK3-202ENST00000377011 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 TRAV17A0A0B4J275 112 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 A0A1W2PQL4 384 aaPredicted RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 MEIOCA2RUB1 952 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 PINLYPA6NC86 204 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 FAM25AB3EWG3 89 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 FAM25CB3EWG5 89 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 FAM25GB3EWG6 89 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 SURF4O15260 269 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 THBS1P07996 1170 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 S1PR1P21453 382 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 TCEA1P23193 301 aaKnown RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 HLA-DMAP28067 261 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 NKX2-5P52952 324 aaPredicted RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 RPS25P62851 125 aaKnown RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 RNF4P78317 190 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 OC90Q02509 493 aaPredicted RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 ZNF267Q14586 743 aaPredicted RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 PGGHGQ32M88 737 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 SLC35F1Q5T1Q4 408 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 CDC73Q6P1J9 531 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 MZT2AQ6P582 158 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 ZNF620Q6ZNG0 422 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 GID4Q8IVV7 300 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 PEX5LQ8IYB4 626 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 SLC9A6Q92581 669 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 TRIM63Q969Q1 353 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 C1GALT1C1Q96EU7 318 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 GIMAP5Q96F15 307 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 SCMH1Q96GD3 660 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 DIRAS2Q96HU8 199 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 DGAT2Q96PD7 388 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 SOSTQ9BQB4 213 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 UTP23Q9BRU9 249 aaKnown RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 TRAF4Q9BUZ4 470 aaPredicted RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 FN3KQ9H479 309 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 MTHFD2LQ9H903 347 aaPredicted RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 DEPPQ9NTK1 212 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 LRFN1Q9P244 771 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 SPACA6W5XKT8 324 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 ICE1Q9Y2F5 2266 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 DIDO1Q9BTC0 2240 aaKnown RBP11.24□□□□□ -0.61
VRK3-202ENST00000377011 CRYBG3Q68DQ2 2970 aa11.24□□□□□ -0.61
VRK3-202ENST00000377011 CLEC18AA5D8T8 446 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 G3V3Y1 287 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 SSX4O60224 188 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 TMCC2O75069 709 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 YES1P07947 543 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 CSF3P09919 207 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 CD53P19397 219 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 RCVRNP35243 200 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 MC3RP41968 323 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 CAPZA2P47755 286 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 RGS8P57771 180 aaPredicted RBP11.23□□□□□ -0.61
VRK3-202ENST00000377011 GPR85P60893 370 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 MRPS15P82914 257 aaKnown RBP11.23□□□□□ -0.61
VRK3-202ENST00000377011 CHRNEQ04844 493 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 SERTAD2Q14140 314 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 LCN1P1Q5VSP4 162 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 MFSD12Q6NUT3 480 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 LYPD8Q6UX82 237 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 CLEC18BQ6UXF7 455 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 PLEKHM3Q6ZWE6 761 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.23□□□□□ -0.61
VRK3-202ENST00000377011 LIX1LQ8IVB5 337 aa11.23□□□□□ -0.61
VRK3-202ENST00000377011 ARIH2OSQ8N7S6 290 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms