RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 HS3ST6Q96QI5 342 aa19.48■□□□□ 0.71
SRM-201ENST00000376957 ZNF587Q96SQ5 575 aaPredicted RBP19.48■□□□□ 0.71
SRM-201ENST00000376957 SLC19A3Q9BZV2 496 aa19.48■□□□□ 0.71
SRM-201ENST00000376957 PCDHAC1Q9H158 963 aa19.48■□□□□ 0.71
SRM-201ENST00000376957 AMDHD2Q9Y303 409 aa19.48■□□□□ 0.71
SRM-201ENST00000376957 CSMD2Q7Z408 3487 aa19.48■□□□□ 0.71
SRM-201ENST00000376957 CCDC168Q8NDH2 2452 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 IGKV1D-42A0A075B6H8 117 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 CLOCKO15516 846 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 ARHGEF9O43307 516 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 TPST2O60704 377 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 SMPD2O60906 423 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 TMCC2O75069 709 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 SLC43A1O75387 559 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 HIST1H2ABP04908 130 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 CD53P19397 219 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 PRDX6P30041 224 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 NTF4P34130 210 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 P2RY4P51582 365 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 TAS2R41P59536 307 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 HMBOX1Q6NT76 420 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 HACD2Q6Y1H2 254 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 HIST3H2AQ7L7L0 130 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 CARM1Q86X55 608 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 HIST1H2ACQ93077 130 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 SLC7A7Q9UM01 511 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 MGAT4BQ9UQ53 548 aa19.47■□□□□ 0.71
SRM-201ENST00000376957 A0A1W2PPR1 153 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 HS3ST1O14792 307 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 GMNNO75496 209 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 CBLP22681 906 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 CLDN17P56750 224 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 PRPS1P60891 318 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 LIPEQ05469 1076 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 NPTX1Q15818 432 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 GABRA6Q16445 453 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 EPHX4Q8IUS5 362 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 P3H2Q8IVL5 708 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 PIK3C3Q8NEB9 887 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 OR52N5Q8NH56 324 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 TPD52L3Q96J77 140 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 TMEM204Q9BSN7 226 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 LINC00470Q9BZP3 86 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 ALG2Q9H553 416 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 MOV10Q9HCE1 1003 aaKnown RBP19.46■□□□□ 0.71
SRM-201ENST00000376957 OBP2BQ9NPH6 170 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 MRPL39Q9NYK5 338 aaKnown RBP19.46■□□□□ 0.71
SRM-201ENST00000376957 NOX1Q9Y5S8 564 aa19.46■□□□□ 0.71
SRM-201ENST00000376957 FZD7O75084 574 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 ITGA5P08648 1049 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 CDH2P19022 906 aaPredicted RBP19.45■□□□□ 0.7
SRM-201ENST00000376957 AHCYP23526 432 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 PTAFRP25105 342 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 LOXP28300 417 aaPredicted RBP19.45■□□□□ 0.7
SRM-201ENST00000376957 SH3BGRP55822 239 aaPredicted RBP19.45■□□□□ 0.7
SRM-201ENST00000376957 SELENOWP63302 87 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 PUDPQ08623 228 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 CYBRD1Q53TN4 286 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 C9orf135Q5VTT2 229 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 ADAM5Q6NVV9 412 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 LINC00114Q6XXX2 140 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 DEF8Q6ZN54 512 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 SLC15A3Q8IY34 581 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 KDM8Q8N371 416 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 GPR137CQ8N3F9 429 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 ZNF611Q8N823 705 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 ANKK1Q8NFD2 765 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 TMEM171Q8WVE6 324 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 AKAP1Q92667 903 aaKnown RBP eCLIP19.45■□□□□ 0.7
SRM-201ENST00000376957 SLC41A3Q96GZ6 507 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 WFDC6Q9BQY6 131 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 CXorf56Q9H5V9 222 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 NANSQ9NR45 359 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 FAIMQ9NVQ4 179 aa19.45■□□□□ 0.7
SRM-201ENST00000376957 CSMD1Q96PZ7 3565 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 PDLIM1O00151 329 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 DCTN3O75935 186 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 BGLAPP02818 100 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 THRBP10828 461 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 DRD4P21917 467 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 SELENOPP49908 381 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 SLC7A2P52569 658 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 BSPH1Q075Z2 132 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 OR5J2Q8NH18 312 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 FBXW5Q969U6 566 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 HS6ST2Q96MM7 605 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 LRRC37BQ96QE4 947 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 AMBRA1Q9C0C7 1298 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 MYLK2Q9H1R3 596 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 FKRPQ9H9S5 495 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 B3GAT2Q9NPZ5 323 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 CMTM6Q9NX76 183 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 ARL2BPQ9Y2Y0 163 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 OTOGQ6ZRI0 2925 aa19.44■□□□□ 0.7
SRM-201ENST00000376957 AKAP6Q13023 2319 aa19.43■□□□□ 0.7
SRM-201ENST00000376957 ZNF726A6NNF4 738 aa19.43■□□□□ 0.7
SRM-201ENST00000376957 OR5F1O95221 314 aa19.43■□□□□ 0.7
SRM-201ENST00000376957 ADORA3P0DMS8 318 aa19.43■□□□□ 0.7
SRM-201ENST00000376957 UMPSP11172 480 aa19.43■□□□□ 0.7
SRM-201ENST00000376957 RBM34P42696 430 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms