RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 NDEL1Q9GZM8 345 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 CCDC86Q9H6F5 360 aaKnown RBP18.4■□□□□ 0.54
VSX1-202ENST00000376709 RASD1Q9Y272 281 aa18.4■□□□□ 0.54
VSX1-202ENST00000376709 CPED1A4D0V7 1026 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 TMEM221A6NGB7 291 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 OR6C76A6NM76 312 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 OGG1O15527 345 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 EPHA8P29322 1005 aaPredicted RBP18.39■□□□□ 0.53
VSX1-202ENST00000376709 PNLIPRP2P54317 469 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 FOXL2P58012 376 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 KCNJ8Q15842 424 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 TMEM71Q6P5X7 295 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 PAMR1Q6UXH9 720 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 UBQLNLQ8IYU4 475 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 UBE2J2Q8N2K1 259 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 TSSK2Q96PF2 358 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 SMAD5Q99717 465 aaKnown RBP18.39■□□□□ 0.53
VSX1-202ENST00000376709 IER2Q9BTL4 223 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 MMP28Q9H239 520 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 RXFP3Q9NSD7 469 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 EXTL2Q9UBQ6 330 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 POU2F3Q9UKI9 436 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 DMDP11532 3685 aa18.39■□□□□ 0.53
VSX1-202ENST00000376709 SCO2O43819 266 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 EIF4E2O60573 245 aaKnown RBP18.38■□□□□ 0.53
VSX1-202ENST00000376709 PGCP20142 388 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 EDNRAP25101 427 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 TALDO1P37837 337 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 HTR3AP46098 478 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 NKX2-5P52952 324 aaPredicted RBP18.38■□□□□ 0.53
VSX1-202ENST00000376709 PMS2CLQ68D20 193 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 RHBDD2Q6NTF9 364 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 RPL22L1Q6P5R6 122 aaKnown RBP18.38■□□□□ 0.53
VSX1-202ENST00000376709 IL20RBQ6UXL0 311 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 TMPRSS9Q7Z410 1059 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 DNAJA3Q96EY1 480 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 FAM210AQ96ND0 272 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 TTYH2Q9BSA4 534 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 SYNDIG1Q9H7V2 258 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 B3GAT2Q9NPZ5 323 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 A0A1W2PPK0 400 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 TOX3O15405 576 aaPredicted RBP18.38■□□□□ 0.53
VSX1-202ENST00000376709 CDC40O60508 579 aaKnown RBP eCLIP18.38■□□□□ 0.53
VSX1-202ENST00000376709 SLC25A12O75746 678 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 HSF2Q03933 536 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 LINC01590Q5TEZ4 76 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 ZNF544Q6NX49 715 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 LRRC28Q86X40 367 aaPredicted RBP18.38■□□□□ 0.53
VSX1-202ENST00000376709 SAMD12Q8N8I0 201 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 PLPP5Q8NEB5 264 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 MAFAQ8NHW3 353 aaPredicted RBP18.38■□□□□ 0.53
VSX1-202ENST00000376709 ENKURQ8TC29 256 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 STT3BQ8TCJ2 826 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 FKRPQ9H9S5 495 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 NPAP1Q9NZP6 1156 aa18.38■□□□□ 0.53
VSX1-202ENST00000376709 IGHV3-20A0A0C4DH32 117 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 CCNKO75909 580 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 GP1BBP13224 206 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 RAB3BP20337 219 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 PSMB10P40306 273 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 INPP1P49441 399 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 SLC25A1P53007 311 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 RIN1Q13671 783 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 CBFBQ13951 182 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 CCDC58Q4VC31 144 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 GUSBP11Q6P575 273 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 ZNF574Q6ZN55 896 aaPredicted RBP18.37■□□□□ 0.53
VSX1-202ENST00000376709 COX15Q7KZN9 410 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 NUP54Q7Z3B4 507 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 TEX19Q8NA77 164 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 ZNF511Q8NB15 262 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 PDCD1LG2Q9BQ51 273 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 DUSP23Q9BVJ7 150 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 PI4KAP42356 2102 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 CCDC163A0A0D9SF12 145 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 PSMD9O00233 223 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 PLA2G10O15496 165 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 ARL6IP5O75915 188 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 HLA-DQB1P01920 261 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 HOXA6P31267 233 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 EVI2BP34910 448 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 THBS2P35442 1172 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 NCCRP1Q6ZVX7 275 aaPredicted RBP18.37■□□□□ 0.53
VSX1-202ENST00000376709 KANSL1Q7Z3B3 1105 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 ZNF441Q8N8Z8 693 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 TSPAN32Q96QS1 320 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 SRA1Q9HD15 236 aaKnown RBP18.37■□□□□ 0.53
VSX1-202ENST00000376709 SLC22A11Q9NSA0 550 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 ZNF346Q9UL40 294 aaKnown RBP18.37■□□□□ 0.53
VSX1-202ENST00000376709 MOKQ9UQ07 419 aa18.37■□□□□ 0.53
VSX1-202ENST00000376709 H7C1C5 153 aa18.36■□□□□ 0.53
VSX1-202ENST00000376709 LCN6P62502 163 aa18.36■□□□□ 0.53
VSX1-202ENST00000376709 ACY1Q03154 408 aa18.36■□□□□ 0.53
VSX1-202ENST00000376709 EMC4Q5J8M3 183 aa18.36■□□□□ 0.53
VSX1-202ENST00000376709 RSBN1Q5VWQ0 802 aaPredicted RBP18.36■□□□□ 0.53
VSX1-202ENST00000376709 MAMSTRQ6ZN01 415 aa18.36■□□□□ 0.53
VSX1-202ENST00000376709 WDR5BQ86VZ2 330 aa18.36■□□□□ 0.53
VSX1-202ENST00000376709 OR14A2Q96R54 314 aa18.36■□□□□ 0.53
VSX1-202ENST00000376709 OR6C1Q96RD1 312 aa18.36■□□□□ 0.53
VSX1-202ENST00000376709 PILRBQ9UKJ0 227 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms