RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PAX7P23759 505 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 EFNA4P52798 201 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 HMBOX1Q6NT76 420 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 REEP3Q6NUK4 255 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 HIPK1Q86Z02 1210 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 KDM8Q8N371 416 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 FBXO17Q96EF6 278 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 KTI12Q96EK9 354 aaPredicted RBP18.36■□□□□ 0.53
VSX1-201ENST00000376707 SLC38A2Q96QD8 506 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 TNFRSF13CQ96RJ3 184 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 PTDSS2Q9BVG9 487 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 IKZF5Q9H5V7 419 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 TMEM38AQ9H6F2 299 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 CORO2BQ9UQ03 480 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 SONP18583 2426 aaKnown RBP18.35■□□□□ 0.53
VSX1-201ENST00000376707 PLCE1Q9P212 2302 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 UPK3AO75631 287 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 CSF3P09919 207 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 ZNF43P17038 809 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 CLDN17P56750 224 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 CDK6Q00534 326 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 EGR4Q05215 589 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 LOXL1Q08397 574 aaPredicted RBP18.35■□□□□ 0.53
VSX1-201ENST00000376707 TMEM249Q2WGJ8 235 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 C6orf89Q6UWU4 347 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 DLEU7Q6UYE1 221 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 CXXC5Q7LFL8 322 aaKnown RBP18.35■□□□□ 0.53
VSX1-201ENST00000376707 LSMEM1Q8N8F7 131 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 NFKBIDQ8NI38 313 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 BCL2L2Q92843 193 aaPredicted RBP18.35■□□□□ 0.53
VSX1-201ENST00000376707 ZNF317Q96PQ6 595 aaPredicted RBP18.35■□□□□ 0.53
VSX1-201ENST00000376707 LINC00470Q9BZP3 86 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 ZNF385DQ9H6B1 395 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 C12orf10Q9HB07 376 aa18.35■□□□□ 0.53
VSX1-201ENST00000376707 CHD3Q12873 2000 aaKnown RBP18.34■□□□□ 0.53
VSX1-201ENST00000376707 OR2T1O43869 369 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 FZD7O75084 574 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 IFNA2P01563 188 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 CRYAAP02489 173 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 SH3BGRP55822 239 aaPredicted RBP18.34■□□□□ 0.53
VSX1-201ENST00000376707 ROR2Q01974 943 aaKnown RBP18.34■□□□□ 0.53
VSX1-201ENST00000376707 C1DQ13901 141 aaKnown RBP18.34■□□□□ 0.53
VSX1-201ENST00000376707 ANKRD16Q6P6B7 361 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 DHRS4L2Q6PKH6 230 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 C5orf46Q6UWT4 87 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 LINGO2Q7L985 606 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 KRT73Q86Y46 540 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 SLC38A4Q969I6 547 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 KATNB1Q9BVA0 655 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 SPATA5L1Q9BVQ7 753 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 RCE1Q9Y256 329 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 ABCA1O95477 2261 aa18.34■□□□□ 0.53
VSX1-201ENST00000376707 A0A096LPE4 126 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 ARPC4-TTLL3A0A0A6YYG9 625 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 A0A1B0GWA3 101 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 A0A1W2PPZ6 126 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 AIM2O14862 343 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 SLC43A1O75387 559 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 SNRPD2P62316 118 aaKnown RBP18.33■□□□□ 0.52
VSX1-201ENST00000376707 TUBA1BP68363 451 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 TUBA4AP68366 448 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 IL1RL1Q01638 556 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 ADRM1Q16186 407 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 SWI5Q1ZZU3 235 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 CHRFAM7AQ494W8 412 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 C6orf52Q5T4I8 152 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 FAM69AQ5T7M9 428 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 TUBA1AQ71U36 451 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 COMTD1Q86VU5 262 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 DPP10Q8N608 796 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 MAGEE2Q8TD90 523 aaPredicted RBP18.33■□□□□ 0.52
VSX1-201ENST00000376707 C10orf105Q8TEF2 133 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 OXGR1Q96P68 337 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 CPPED1Q9BRF8 314 aaPredicted RBP18.33■□□□□ 0.52
VSX1-201ENST00000376707 SIKE1Q9BRV8 207 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 MOV10Q9HCE1 1003 aaKnown RBP18.33■□□□□ 0.52
VSX1-201ENST00000376707 SEC14L4Q9UDX3 406 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 FKBP7Q9Y680 259 aa18.33■□□□□ 0.52
VSX1-201ENST00000376707 EVPLLA8MZ36 301 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 M0R082 166 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 EDF1O60869 148 aaKnown RBP18.32■□□□□ 0.52
VSX1-201ENST00000376707 LY6HO94772 140 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 F12P00748 615 aaPredicted RBP18.32■□□□□ 0.52
VSX1-201ENST00000376707 HTR2AP28223 471 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 SERPINF1P36955 418 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 NCALDP61601 193 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 VLDLRP98155 873 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 SCARB2Q14108 478 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 MST1LQ2TV78 715 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 RUNDC3AQ59EK9 446 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 ALG10BQ5I7T1 473 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 PODNL1Q6PEZ8 512 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 ZNF417Q8TAU3 575 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 RNF217Q8TC41 542 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 DNAJA4Q8WW22 397 aaPredicted RBP18.32■□□□□ 0.52
VSX1-201ENST00000376707 NANOS1Q8WY41 292 aaKnown RBP18.32■□□□□ 0.52
VSX1-201ENST00000376707 PROX1Q92786 737 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 TAAR8Q969N4 342 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 ZNF587Q96SQ5 575 aaPredicted RBP18.32■□□□□ 0.52
VSX1-201ENST00000376707 CA10Q9NS85 328 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms