RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 SETD7Q8WTS6 366 aaKnown RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 FAM151AQ8WW52 585 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF799Q96GE5 643 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 HIST1H4GQ99525 98 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 CHRDL1Q9BU40 450 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ANKRD19PQ9H560 264 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 NMRAL1Q9HBL8 299 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ETNK2Q9NVF9 386 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 SLC7A8Q9UHI5 535 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 MMP17Q9ULZ9 603 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 A0A0G2JLM5 398 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 KIR2DL5BA0A0G2JN68 375 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 KIR2DL5BA0A0G2JPC4 375 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 RBMY1BA6NDE4 496 aaKnown RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 RBMY1EA6NEQ0 496 aaKnown RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 OR5B21A6NL26 309 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 H0Y8G0 127 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 EMC8O43402 210 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 HCRTR1O43613 425 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 BBOX1O75936 387 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 MMP1P03956 469 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 RBMY1DP0C7P1 496 aaKnown RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 RBMY1A1P0DJD3 496 aaKnown RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ATP1B2P14415 290 aaPredicted RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF17P17021 662 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 BTCP35070 178 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 OPRD1P41143 372 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 EPS15P42566 896 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 KIR2DS4P43632 304 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 VDAC2P45880 294 aaPredicted RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 GYG1P46976 350 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 PRPS1P60891 318 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 TIMM10P62072 90 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 TLE4Q04727 773 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ZNF763Q0D2J5 394 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 LRRC74AQ0VAA2 488 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 SCRN3Q0VDG4 424 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ORC2Q13416 577 aaPredicted RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ARFRP1Q13795 201 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 C6orf226Q5I0X4 101 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 C1orf100Q5SVJ3 147 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 TMIGD1Q6UXZ0 262 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 LRRC31Q6UY01 552 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 C19orf35Q6ZS72 473 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 NANOGNBQ7Z5D8 188 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 KIR2DL5AQ8N109 375 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 TPRX1Q8N7U7 411 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 NKAPP1Q8N9T2 125 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 CCDC71LQ8N9Z2 235 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 OR9K2Q8NGE7 335 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 KIR2DL5BQ8NHK3 375 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 FANK1Q8TC84 345 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 RNF139Q8WU17 664 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 TUBGCP3Q96CW5 907 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 ITCHQ96J02 903 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 CNDP1Q96KN2 507 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 CNN2Q99439 309 aaKnown RBP1.42□□□□□ -2.18
VPS13A-206ENST00000376646 P2RY13Q9BPV8 354 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 HES7Q9BYE0 225 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 C20orf85Q9H1P6 137 aa1.42□□□□□ -2.18
VPS13A-206ENST00000376646 RLFQ13129 1914 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 FAM47DPA6NHR8 397 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 USP27XA6NNY8 438 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 A8MUA0 341 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 AP3B1O00203 1094 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 AGPAT2O15120 278 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 HPNP05981 417 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 UQCRFS1P1P0C7P4 283 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 UBTFL1P0CB47 393 aaPredicted RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 SLC2A3P11169 496 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 GLP1RP43220 463 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 KPNA2P52292 529 aaKnown RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 GNB2P62879 340 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ENPEPQ07075 957 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 MRPL28Q13084 256 aaKnown RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PDIA2Q13087 525 aaKnown RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 NSDHLQ15738 373 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 IL17AQ16552 155 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 OTPQ5XKR4 325 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 C1orf94Q6P1W5 598 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ZYG11AQ6WRX3 759 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 IL34Q6ZMJ4 242 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 RFLNAQ6ZTI6 216 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 TAS2R42Q7RTR8 314 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PRSS41Q7RTY9 318 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 EGFL6Q8IUX8 553 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 NECAB1Q8N987 351 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 C20orf203Q8NBC4 194 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 TRPV1Q8NER1 839 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 OR2L3Q8NG85 312 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 OR10G3Q8NGC4 313 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 OR51S1Q8NGJ8 323 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 OR9G1Q8NH87 305 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 ARPC1AQ92747 370 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 FRAT1Q92837 279 aaPredicted RBP1.41□□□□□ -2.18
VPS13A-206ENST00000376646 FAM104AQ969W3 186 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 TMEM101Q96IK0 257 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 TPD52L3Q96J77 140 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 PLEKHA8Q96JA3 519 aa1.41□□□□□ -2.18
VPS13A-206ENST00000376646 IFT74Q96LB3 600 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms