RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 AIPO00170 330 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 ARPC5O15511 151 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 FMO6PO60774 539 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 ECDO95905 644 aaPredicted RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 FCER2P06734 321 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 LPLP06858 475 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 NMBP08949 121 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 CT62P0C5K7 136 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 IFNGR1P15260 489 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 CDK2P24941 298 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 NUP62P37198 522 aaPredicted RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 EPHA4P54764 986 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 ACTA2P62736 377 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 ACTG2P63267 376 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 PLA2G7Q13093 441 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 HLXQ14774 488 aaPredicted RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 USP53Q70EK8 1073 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 DNAAF1Q8NEP3 725 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 ST8SIA4Q92187 359 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 RGP1Q92546 391 aaPredicted RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 TAS2R10Q9NYW0 307 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 DAPP1Q9UN19 280 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 A0A1W2PPC1 479 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ANKRD20A5PA0PJZ0 165 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 OR2M5A3KFT3 312 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 FGF17O60258 216 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 SUSD5O60279 629 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 CTSVO60911 334 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 PPM1BO75688 479 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ZFPL1O95159 310 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ZP3P21754 424 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 STX4Q12846 297 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ENPP2Q13822 863 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 MELKQ14680 651 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ZMYND11Q15326 602 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ALG10BQ5I7T1 473 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ELFN2Q5R3F8 820 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 PWWP2BQ6NUJ5 590 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ARSKQ6UWY0 536 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 STPG2Q8N412 459 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 SPICQ8N5J4 248 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 OR5T3Q8NGG3 340 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 S100A16Q96FQ6 103 aaKnown RBP12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 TOE1Q96GM8 510 aaKnown RBP12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 HSPA12BQ96MM6 686 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 TIMM29Q9BSF4 260 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 TAS2R5Q9NYW4 299 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 SERTAD3Q9UJW9 196 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ING1Q9UK53 422 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 CHURC1-FNTBB4DL54 471 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ZNF749O43361 778 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 CREBL2O60519 120 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 GALR3O60755 368 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 RPP14O95059 124 aaKnown RBP12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 GIPP09681 153 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 COL9A1P20849 921 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 AK4P27144 223 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ADH7P40394 386 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 AP3S2P59780 193 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 DHODHQ02127 395 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 PON3Q15166 354 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 CSRP2Q16527 193 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ZNF613Q6PF04 617 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 OR5M1Q8NGP8 315 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 MFRPQ9BY79 579 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 AKAP7Q9P0M2 348 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 BAIAP2Q9UQB8 552 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 V9GY05 133 aa12.92□□□□□ -0.34
CLCNKA-202ENST00000375692 ALPK2Q86TB3 2170 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 OR6C68A6NDL8 312 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 NAP1L6A6NFF2 107 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 PYCARD-AS1I3L0S3 204 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 BET1O15155 118 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 BRINP1O60477 761 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 SLC35G6P0C7Q6 338 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 VSIG10L2P0DP72 767 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 TLX1P31314 330 aaPredicted RBP12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 RPL4P36578 427 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 CAPZA2P47755 286 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 SOX2P48431 317 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 SMAD4Q13485 552 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 ZNF626Q68DY1 528 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 NUDT18Q6ZVK8 323 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 SIPA1Q96FS4 1042 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 GUCD1Q96NT3 240 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 PHF7Q9BWX1 381 aaPredicted RBP12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 CD93Q9NPY3 652 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 TBC1D29Q9UFV1 150 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 B3GALT2O43825 422 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 OR2A4O95047 310 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 KLF8O95600 359 aaPredicted RBP12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 ACAA2P42765 397 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 TNFRSF4P43489 277 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 DIO1P49895 249 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 RAP2BP61225 183 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 CBFBQ13951 182 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 CST6Q15828 149 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 CDRT4Q8N9R6 151 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 OR4N2Q8NGD1 307 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms