RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 DOCK9Q9BZ29 2069 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 UBE2QL1A1L167 161 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 ANKRD61A6NGH8 418 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 H3BUI4 141 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 SELENOFO60613 162 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 OR2T7P0C7T2 308 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 HIST1H1CP16403 213 aaKnown RBP10.17□□□□□ -0.78
CCDC40-203ENST00000374877 CDK2P24941 298 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 PTH2RP49190 550 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 P2RX1P51575 399 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 CEBPEQ15744 281 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 OVCH2Q7RTZ1 564 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 OR52H1Q8NGJ2 320 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 OR2T27Q8NH04 317 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 C10orf90Q96M02 699 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 GPR174Q9BXC1 333 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF350Q9GZX5 532 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 ANKRD20A5PA0PJZ0 165 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 OR2M5A3KFT3 312 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 LRRC72A6NJI9 287 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 PYCARD-AS1I3L0S3 204 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 RNGTTO60942 597 aaKnown RBP10.16□□□□□ -0.78
CCDC40-203ENST00000374877 APOC3P02656 99 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 DPP4P27487 766 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 RPS21P63220 83 aaKnown RBP10.16□□□□□ -0.78
CCDC40-203ENST00000374877 MELKQ14680 651 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 DEFB134Q4QY38 66 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 STPG1Q5TH74 334 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 SYS1Q8N2H4 156 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 FKRPQ9H9S5 495 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 ANKRD10Q9NXR5 420 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 MED11Q9P086 117 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 WNT16Q9UBV4 365 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 SERGEFQ9UGK8 458 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 IER3IP1Q9Y5U9 82 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 V9GY05 133 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 A0A1B0GVT2 93 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF860A6NHJ4 632 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 PTP4A3O75365 173 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF35P13682 527 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 AK4P27144 223 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-203ENST00000374877 CMPK1P30085 196 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 ZP2Q05996 745 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 RIPPLY1Q0D2K3 151 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 CBFBQ13951 182 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 PON3Q15166 354 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 C11orf88Q6PI97 169 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 GSG1LQ6UXU4 331 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 OR2L13Q8N349 312 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF454Q8N9F8 522 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 ZDHHC1Q8WTX9 485 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 SHDQ96IW2 340 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 HSPA12BQ96MM6 686 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 TSPAN10Q9H1Z9 355 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-203ENST00000374877 IL21RQ9HBE5 538 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 TMEM138Q9NPI0 162 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 NCDNQ9UBB6 729 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 OR5V1Q9UGF6 321 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 FOXJ3Q9UPW0 622 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 BRWD1Q9NSI6 2320 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 A8MXK9 166 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF749O43361 778 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 B3GALNT1O75752 331 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 OR2A4O95047 310 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 RPP14O95059 124 aaKnown RBP10.16□□□□□ -0.78
CCDC40-203ENST00000374877 SPDEFO95238 335 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 HIST1H2ABP04908 130 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 PEBP1P30086 187 aaKnown RBP10.16□□□□□ -0.78
CCDC40-203ENST00000374877 RPL4P36578 427 aaKnown RBP10.16□□□□□ -0.78
CCDC40-203ENST00000374877 SOX2P48431 317 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 GK2Q14410 553 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-203ENST00000374877 RPE65Q16518 533 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 NDUFAF6Q330K2 333 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 HIST3H2AQ7L7L0 130 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 MFSD9Q8NBP5 474 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 HIST1H2ACQ93077 130 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 OR2A7Q96R45 310 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 RAB11FIP5Q9BXF6 653 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 MCCC2Q9HCC0 563 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 C2orf42Q9NWW7 574 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 ADAM18Q9Y3Q7 739 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 HRH3Q9Y5N1 445 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 C5orf42Q9H799 3197 aa10.16□□□□□ -0.78
CCDC40-203ENST00000374877 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 FAM171A2A8MVW0 826 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 H3BSH0 61 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 ACOT7O00154 380 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 GOSR2O14653 212 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 IMPA2O14732 288 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 SIGLEC5O15389 551 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 DNAJB6O75190 326 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 NDUFB6O95139 128 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 PAK4O96013 591 aaPredicted RBP10.15□□□□□ -0.78
CCDC40-203ENST00000374877 PLATP00750 562 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 GABRA1P14867 456 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 PPP3CBP16298 524 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 ADPRHP54922 357 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 DLX5P56178 289 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 STARD6P59095 220 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 PPP2CBP62714 309 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms