RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RPRD1BQ9NQG5 326 aaKnown RBP17.76■□□□□ 0.43
HDAC1-201ENST00000373548 TBCCD1Q9NVR7 557 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 COL27A1Q8IZC6 1860 aaPredicted RBP17.76■□□□□ 0.43
HDAC1-201ENST00000373548 PLPP2O43688 288 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 ZFAND5O76080 213 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 GLCEO94923 617 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 NAGAP17050 411 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 MPLP40238 635 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 SLC25A1P53007 311 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 ZNF181Q2M3W8 571 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 RPTNQ6XPR3 784 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 RNF138Q8WVD3 245 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 MYOTQ9UBF9 498 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 NXT1Q9UKK6 140 aaKnown RBP17.75■□□□□ 0.43
HDAC1-201ENST00000373548 PCDHGB6Q9Y5F9 930 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 CASKO14936 926 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 MAGEB4O15481 346 aaPredicted RBP17.75■□□□□ 0.43
HDAC1-201ENST00000373548 GTF2E2P29084 291 aaKnown RBP17.75■□□□□ 0.43
HDAC1-201ENST00000373548 PYCR1P32322 319 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 CAV3P56539 151 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 TAS2R43P59537 309 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 C17orf67Q0P5P2 114 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 TP53I3Q53FA7 332 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 MESTQ5EB52 335 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 FAM198BQ6UWH4 519 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 LYPD8Q6UX82 237 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 WDFY2Q96P53 400 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 TSSK2Q96PF2 358 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 TAS2R5Q9NYW4 299 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 GRHPRQ9UBQ7 328 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 CMAHPQ9Y471 501 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 PCDHGB7Q9Y5F8 929 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 WDFY4Q6ZS81 3184 aa17.75■□□□□ 0.43
HDAC1-201ENST00000373548 ANKUB1A6NFN9 424 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 A8MVM7 634 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 CBFA2T3O75081 653 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 LDOC1O95751 146 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-201ENST00000373548 MT-ATP6P00846 226 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 TGM1P22735 817 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 CAPZA2P47755 286 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 KRR1Q13601 381 aaKnown RBP17.74■□□□□ 0.43
HDAC1-201ENST00000373548 EMC4Q5J8M3 183 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 STEAP3Q658P3 488 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 BICRALQ6AI39 1079 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 MAMDC2Q7Z304 686 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-201ENST00000373548 NLGN4YQ8NFZ3 816 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-201ENST00000373548 MR1Q95460 341 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 SLC25A36Q96CQ1 311 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 SDHCQ99643 169 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-201ENST00000373548 ALG12Q9BV10 488 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 NDEL1Q9GZM8 345 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 ARRDC1-AS1Q9H2J1 176 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 POLE4Q9NR33 117 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 GPN3Q9UHW5 284 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-201ENST00000373548 COPS3Q9UNS2 423 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 GRIP1Q9Y3R0 1128 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 TTC28Q96AY4 2481 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 FAM171A2A8MVW0 826 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 KLK3P07288 261 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-201ENST00000373548 CD53P19397 219 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 CDONQ4KMG0 1287 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 FAM69AQ5T7M9 428 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 C1orf140Q5VVS0 124 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 DMKNQ6E0U4 476 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-201ENST00000373548 PLEKHG7Q6ZR37 379 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 SYS1Q8N2H4 156 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 TTC9Q92623 222 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 NPAS1Q99742 590 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 OR11A1Q9GZK7 315 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 MIXL1Q9H2W2 232 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 ST6GALNAC2Q9UJ37 374 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 ZNF346Q9UL40 294 aaKnown RBP17.74■□□□□ 0.43
HDAC1-201ENST00000373548 UGT2A1Q9Y4X1 527 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 HRH3Q9Y5N1 445 aa17.74■□□□□ 0.43
HDAC1-201ENST00000373548 LOC102723996A0A087X1L8 192 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 ISPDA4D126 451 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 SLC35F4A4IF30 521 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 LOC110117498-PIK3R3F6TDL0 507 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 OR2J2O76002 312 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 GP1BAP07359 652 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 PRKCAP17252 672 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 ACP1P24666 158 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 ACTA2P62736 377 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 ACTG2P63267 376 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 SLC3A1Q07837 685 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 DNASE1L3Q13609 305 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 PCOLCEQ15113 449 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 SGCBQ16585 318 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 ZNF528Q3MIS6 628 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 GPR139Q6DWJ6 353 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 DBX2Q6ZNG2 339 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 MINDY2Q8NBR6 621 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 TMEM234Q8WY98 164 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 PELI1Q96FA3 418 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 PGLYRP3Q96LB9 341 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 ULBP3Q9BZM4 244 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 CCDC86Q9H6F5 360 aaKnown RBP17.73■□□□□ 0.43
HDAC1-201ENST00000373548 ABCB9Q9NP78 766 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 V9GYH0 126 aa17.73■□□□□ 0.43
HDAC1-201ENST00000373548 TEX51A0A1B0GUA7 166 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms