RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ZAR1Q86SH2 424 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 OR4D10Q8NGI6 311 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 OR1S1Q8NH92 325 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 ATOH1Q92858 354 aaPredicted RBP12.57□□□□□ -0.4
USP49-201ENST00000373006 ZBP1Q9H171 429 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 PLEKHA1Q9HB21 404 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 OPN4Q9UHM6 478 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 MRTO4Q9UKD2 239 aaKnown RBP12.57□□□□□ -0.4
USP49-201ENST00000373006 PRELID3BQ9Y3B1 194 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 OR2W5A6NFC9 320 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 GOSR2O14653 212 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 SGCEO43556 437 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 ADAM11O75078 769 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 LDB3O75112 727 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 PAK4O96013 591 aaPredicted RBP12.57□□□□□ -0.4
USP49-201ENST00000373006 FGF2P09038 288 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 RAB3AP20336 220 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 PEBP1P30086 187 aaKnown RBP12.57□□□□□ -0.4
USP49-201ENST00000373006 ELAVL3Q14576 367 aaKnown RBP12.57□□□□□ -0.4
USP49-201ENST00000373006 PWWP2BQ6NUJ5 590 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 ZNF619Q8N2I2 560 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 TMIEQ8NEW7 156 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 VWCEQ96DN2 955 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 NMNAT3Q96T66 252 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 TMEM138Q9NPI0 162 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 HAO2Q9NYQ3 351 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 NCDNQ9UBB6 729 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 V9GY05 133 aa12.57□□□□□ -0.4
USP49-201ENST00000373006 OTOL1A6NHN0 477 aaPredicted RBP12.56□□□□□ -0.4
USP49-201ENST00000373006 NDUFB6O95139 128 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 ZFPL1O95159 310 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 IFNGP01579 166 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 OR2T7P0C7T2 308 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 PLAURQ03405 335 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 CEBPEQ15744 281 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 HYAL4Q2M3T9 481 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 RPL13AP3Q6NVV1 102 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 ADAMTSL4Q6UY14 1074 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 PDZD9Q8IXQ8 264 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 COX18Q8N8Q8 333 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 OR4K14Q8NGD5 310 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 OR2T27Q8NH04 317 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 ZPLD1Q8TCW7 415 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 SLC6A15Q9H2J7 730 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 PRSS16Q9NQE7 514 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 LHX6Q9UPM6 363 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 LRRC72A6NJI9 287 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 SDC3O75056 442 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 DBIP07108 87 aaKnown RBP12.56□□□□□ -0.4
USP49-201ENST00000373006 AK4P27144 223 aaPredicted RBP12.56□□□□□ -0.4
USP49-201ENST00000373006 ACTA2P62736 377 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 ACTG2P63267 376 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 SCRN3Q0VDG4 424 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 GK2Q14410 553 aaPredicted RBP12.56□□□□□ -0.4
USP49-201ENST00000373006 EXOSC7Q15024 291 aaKnown RBP12.56□□□□□ -0.4
USP49-201ENST00000373006 YOD1Q5VVQ6 348 aaPredicted RBP12.56□□□□□ -0.4
USP49-201ENST00000373006 ZCCHC12Q6PEW1 402 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 OR2L13Q8N349 312 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 HSPA12BQ96MM6 686 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 ZNF350Q9GZX5 532 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 TMEM27Q9HBJ8 222 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 FLRT3Q9NZU0 649 aa12.56□□□□□ -0.4
USP49-201ENST00000373006 GXYLT2A0PJZ3 443 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 MCIDASD6RGH6 385 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 RLN2P04090 185 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 PPP3CBP16298 524 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 ITGB8P26012 769 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 POU4F2Q12837 409 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 ZNF234Q14588 700 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 PON3Q15166 354 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 ODF4Q2M2E3 257 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 PCGF3Q3KNV8 242 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 TMEM52BQ4KMG9 183 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 ZNF660Q6AZW8 331 aaPredicted RBP12.55□□□□□ -0.4
USP49-201ENST00000373006 C11orf88Q6PI97 169 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 OR4E2Q8NGC2 313 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 OR2L8Q8NGY9 312 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 EXOSC3Q9NQT5 275 aaKnown RBP12.55□□□□□ -0.4
USP49-201ENST00000373006 MAFFQ9ULX9 164 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 CNTRLQ7Z7A1 2325 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 MYO15AQ9UKN7 3530 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 OR6C65A6NJZ3 312 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 TTLL8A6PVC2 850 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 C4orf47A7E2U8 309 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 PRR32B1ATL7 298 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 THBS1P07996 1170 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 ITPKBP27987 946 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 SLC6A6P31641 620 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 RPL4P36578 427 aaKnown RBP12.55□□□□□ -0.4
USP49-201ENST00000373006 CENPAP49450 140 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 TAS2R20P59543 309 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 FHL1Q13642 323 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 SWI5Q1ZZU3 235 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 CLRN3Q8NCR9 226 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 SLC2A12Q8TD20 617 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 RGP1Q92546 391 aaPredicted RBP12.55□□□□□ -0.4
USP49-201ENST00000373006 PNPLA2Q96AD5 504 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 RSPH9Q9H1X1 276 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms