RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ST6GALNAC5Q9BVH7 336 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 SLC25A32Q9H2D1 315 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 MYEF2Q9P2K5 600 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 INTS6Q9UL03 887 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 A0A1B0GV72 72 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 SERPINA5P05154 406 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 GABRA3P34903 492 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 HIST1H3AP68431 136 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 ENDOGQ14249 297 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 NRARPQ7Z6K4 114 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR13C5Q8NGS8 318 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 DTD2Q96FN9 168 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 MAP3K3Q99759 626 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 ZFYVE21Q9BQ24 234 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 F11P03951 625 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 CARD18P57730 90 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 SNTB1Q13884 538 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR4C11Q6IEV9 310 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 APOOLQ6UXV4 268 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 KRTCAP2Q8N6L1 136 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 RADILQ96JH8 1075 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 LPAR4Q99677 370 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 TPPP3Q9BW30 176 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 A0A0J9YY10 115 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 C1orf226A1L170 272 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 SNNO75324 88 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR5H8P0DN80 308 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 UBALD2Q8IYN6 164 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR5B3Q8NH48 314 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 SFXN5Q8TD22 340 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 GGHQ92820 318 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 CMSS1Q9BQ75 279 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 FLVCR2Q9UPI3 526 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 RRP8O43159 456 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 GCGRP47871 477 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 ARG2P78540 354 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 MFGE8Q08431 387 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 TMEM35AQ53FP2 167 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 UNC50Q53HI1 259 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 PAGE3Q5JUK9 113 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 RAET1LQ5VY80 246 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 RHEBL1Q8TAI7 183 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 ZNF417Q8TAU3 575 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 GATA6Q92908 595 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 NSUN5Q96P11 429 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 C1orf123Q9NWV4 160 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 JRKO75564 520 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 ARSBP15848 533 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 EMP3P54852 163 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 RAB11AP62491 216 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 ETFDHQ16134 617 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 TP53INP2Q8IXH6 220 aa13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 GDF2Q9UK05 429 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-202ENST00000372190 ABLIM3O94929 683 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 LGI1O95970 557 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR10J4P0C629 311 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 HOXA1P49639 335 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 RAB13P51153 203 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 PROX2Q3B8N5 592 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 ZFAND4Q86XD8 727 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 LRRC25Q8N386 305 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 GATSQ8NAP1 163 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR10D4PQ8NGN7 298 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 PRO1933Q9H354 126 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 PTRH2Q9Y3E5 179 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 USP3Q9Y6I4 520 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 GPR37L1O60883 481 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 FABP4P15090 132 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 ESPNLQ6ZVH7 1005 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 DUSP19Q8WTR2 217 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 F2RL3Q96RI0 385 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 BOCQ9BWV1 1114 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR51I2Q9H344 312 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 NDUFS8O00217 210 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 BMPR1BO00238 502 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 SYT7O43581 403 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 ACKR3P25106 362 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 ECH1Q13011 328 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR52E8Q6IFG1 317 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 LIPIQ6XZB0 460 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 MARCH4Q9P2E8 410 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 KCNG2Q9UJ96 466 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 A0A087X0M5 115 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 A0A1B0GX30 115 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR6S1Q8NH40 331 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 SLC35E2BP0CK96 405 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 LIPCP11150 499 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 EXOSC6Q5RKV6 272 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 MANEAQ5SRI9 462 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 GLB1L2Q8IW92 636 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 PRSS16Q9NQE7 514 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
RAPGEF1-202ENST00000372190 MYH11P35749 1972 aa13.08□□□□□ -0.31
RAPGEF1-202ENST00000372190 TMEM82A0PJX8 343 aa13.08□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR52A4PA6NMU1 304 aa13.08□□□□□ -0.31
RAPGEF1-202ENST00000372190 IL1RNP18510 177 aa13.08□□□□□ -0.31
RAPGEF1-202ENST00000372190 SHC2P98077 582 aa13.08□□□□□ -0.31
RAPGEF1-202ENST00000372190 PLGLAQ15195 96 aa13.08□□□□□ -0.31
RAPGEF1-202ENST00000372190 MANEALQ5VSG8 457 aa13.08□□□□□ -0.31
RAPGEF1-202ENST00000372190 LCN8Q6JVE9 175 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms